Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Trav11A0A0B4J1J9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav11A0A0B4J1J9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC11.83□□□□□ -0.51
Trav11A0A0B4J1J9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 Gm26917-202ENSMUST00000192833 3329 ntBASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav11A0A0B4J1J9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Hivep3-201ENSMUST00000084306 2973 ntBASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Gm2011-201ENSMUST00000203124 1263 ntBASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Gm10129-202ENSMUST00000193100 1316 ntBASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav11A0A0B4J1J9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav11A0A0B4J1J9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav11A0A0B4J1J9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav11A0A0B4J1J9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav11A0A0B4J1J9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav11A0A0B4J1J9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav11A0A0B4J1J9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav11A0A0B4J1J9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav11A0A0B4J1J9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav11A0A0B4J1J9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav11A0A0B4J1J9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav11A0A0B4J1J9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav11A0A0B4J1J9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav11A0A0B4J1J9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav11A0A0B4J1J9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms