Protein–RNA interactions for Protein: A0A0A6YX19

Ighv6-4, Immunoglobulin heavy variable V6-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv6-4A0A0A6YX19 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv6-4A0A0A6YX19 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ighv6-4A0A0A6YX19 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv6-4A0A0A6YX19 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv6-4A0A0A6YX19 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv6-4A0A0A6YX19 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv6-4A0A0A6YX19 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv6-4A0A0A6YX19 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv6-4A0A0A6YX19 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ighv6-4A0A0A6YX19 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv6-4A0A0A6YX19 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Ighv6-4A0A0A6YX19 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv6-4A0A0A6YX19 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv6-4A0A0A6YX19 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv6-4A0A0A6YX19 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC13.66□□□□□ -0.22
Ighv6-4A0A0A6YX19 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Ighv6-4A0A0A6YX19 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC13.66□□□□□ -0.22
Ighv6-4A0A0A6YX19 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Ighv6-4A0A0A6YX19 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv6-4A0A0A6YX19 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv6-4A0A0A6YX19 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv6-4A0A0A6YX19 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv6-4A0A0A6YX19 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv6-4A0A0A6YX19 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv6-4A0A0A6YX19 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Gm43137-201ENSMUST00000198052 594 ntBASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.65□□□□□ -0.22
Ighv6-4A0A0A6YX19 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Ighv6-4A0A0A6YX19 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ighv6-4A0A0A6YX19 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ighv6-4A0A0A6YX19 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ighv6-4A0A0A6YX19 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ighv6-4A0A0A6YX19 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ighv6-4A0A0A6YX19 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ighv6-4A0A0A6YX19 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.63□□□□□ -0.23
Ighv6-4A0A0A6YX19 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ighv6-4A0A0A6YX19 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ighv6-4A0A0A6YX19 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ighv6-4A0A0A6YX19 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ighv6-4A0A0A6YX19 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ighv6-4A0A0A6YX19 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms