Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-5A0A075B6B5 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-5A0A075B6B5 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav6-5A0A075B6B5 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-5A0A075B6B5 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav6-5A0A075B6B5 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav6-5A0A075B6B5 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-5A0A075B6B5 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-5A0A075B6B5 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-5A0A075B6B5 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-5A0A075B6B5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-5A0A075B6B5 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-5A0A075B6B5 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav6-5A0A075B6B5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-5A0A075B6B5 Gm40848-201ENSMUST00000221998 324 ntBASIC13.31□□□□□ -0.28
Trav6-5A0A075B6B5 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-5A0A075B6B5 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-5A0A075B6B5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav6-5A0A075B6B5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-5A0A075B6B5 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav6-5A0A075B6B5 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-5A0A075B6B5 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav6-5A0A075B6B5 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-5A0A075B6B5 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-5A0A075B6B5 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-5A0A075B6B5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-5A0A075B6B5 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-5A0A075B6B5 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav6-5A0A075B6B5 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-5A0A075B6B5 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-5A0A075B6B5 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.3□□□□□ -0.28
Trav6-5A0A075B6B5 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-5A0A075B6B5 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-5A0A075B6B5 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.3□□□□□ -0.28
Trav6-5A0A075B6B5 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-5A0A075B6B5 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Trav6-5A0A075B6B5 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-5A0A075B6B5 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav6-5A0A075B6B5 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav6-5A0A075B6B5 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-5A0A075B6B5 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-5A0A075B6B5 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms