Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Gm22325-201ENSMUST00000158904 308 ntBASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Trav12d-3A0A075B6A4 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-3A0A075B6A4 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-3A0A075B6A4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-3A0A075B6A4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-3A0A075B6A4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC12.85□□□□□ -0.35
Trav12d-3A0A075B6A4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Trav12d-3A0A075B6A4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-3A0A075B6A4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-3A0A075B6A4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-3A0A075B6A4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav12d-3A0A075B6A4 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-3A0A075B6A4 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-3A0A075B6A4 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Trav12d-3A0A075B6A4 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-3A0A075B6A4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-3A0A075B6A4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-3A0A075B6A4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-3A0A075B6A4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-3A0A075B6A4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-3A0A075B6A4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-3A0A075B6A4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-3A0A075B6A4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-3A0A075B6A4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-3A0A075B6A4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav12d-3A0A075B6A4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Mir6538-201ENSMUST00000183713 110 ntBASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Spcs1-204ENSMUST00000226782 949 ntBASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-3A0A075B6A4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Trav12d-3A0A075B6A4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav12d-3A0A075B6A4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav12d-3A0A075B6A4 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Trav12d-3A0A075B6A4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-3A0A075B6A4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-3A0A075B6A4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-3A0A075B6A4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-3A0A075B6A4 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-3A0A075B6A4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-3A0A075B6A4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-3A0A075B6A4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-3A0A075B6A4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-3A0A075B6A4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC12.83□□□□□ -0.36
Trav12d-3A0A075B6A4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-3A0A075B6A4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms