Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav17A0A075B655 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav17A0A075B655 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav17A0A075B655 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav17A0A075B655 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav17A0A075B655 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav17A0A075B655 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav17A0A075B655 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav17A0A075B655 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav17A0A075B655 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav17A0A075B655 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav17A0A075B655 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav17A0A075B655 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav17A0A075B655 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav17A0A075B655 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav17A0A075B655 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.67□□□□□ -0.22
Trav17A0A075B655 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav17A0A075B655 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav17A0A075B655 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav17A0A075B655 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav17A0A075B655 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav17A0A075B655 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav17A0A075B655 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav17A0A075B655 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav17A0A075B655 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav17A0A075B655 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav17A0A075B655 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav17A0A075B655 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav17A0A075B655 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav17A0A075B655 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav17A0A075B655 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav17A0A075B655 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav17A0A075B655 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav17A0A075B655 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav17A0A075B655 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav17A0A075B655 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav17A0A075B655 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav17A0A075B655 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav17A0A075B655 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav17A0A075B655 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trav17A0A075B655 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav17A0A075B655 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav17A0A075B655 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.65□□□□□ -0.22
Trav17A0A075B655 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav17A0A075B655 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav17A0A075B655 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.65□□□□□ -0.22
Trav17A0A075B655 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav17A0A075B655 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav17A0A075B655 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav17A0A075B655 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav17A0A075B655 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.65□□□□□ -0.22
Trav17A0A075B655 Gm18671-201ENSMUST00000214826 683 ntBASIC13.65□□□□□ -0.22
Trav17A0A075B655 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav17A0A075B655 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.65□□□□□ -0.22
Trav17A0A075B655 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav17A0A075B655 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav17A0A075B655 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav17A0A075B655 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav17A0A075B655 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav17A0A075B655 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Trav17A0A075B655 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav17A0A075B655 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.65□□□□□ -0.22
Trav17A0A075B655 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav17A0A075B655 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trav17A0A075B655 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trav17A0A075B655 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav17A0A075B655 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav17A0A075B655 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav17A0A075B655 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav17A0A075B655 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav17A0A075B655 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav17A0A075B655 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav17A0A075B655 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav17A0A075B655 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Trav17A0A075B655 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.64□□□□□ -0.23
Trav17A0A075B655 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav17A0A075B655 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.64□□□□□ -0.23
Trav17A0A075B655 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav17A0A075B655 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav17A0A075B655 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav17A0A075B655 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav17A0A075B655 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.64□□□□□ -0.23
Trav17A0A075B655 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav17A0A075B655 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav17A0A075B655 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav17A0A075B655 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav17A0A075B655 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav17A0A075B655 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav17A0A075B655 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav17A0A075B655 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav17A0A075B655 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav17A0A075B655 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav17A0A075B655 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.63□□□□□ -0.23
Trav17A0A075B655 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav17A0A075B655 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trav17A0A075B655 Zfp783-201ENSMUST00000095946 670 ntBASIC13.63□□□□□ -0.23
Trav17A0A075B655 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav17A0A075B655 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav17A0A075B655 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav17A0A075B655 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms