Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav5-4A0A075B652 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-4A0A075B652 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-4A0A075B652 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav5-4A0A075B652 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-4A0A075B652 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.36□□□□□ -0.11
Trav5-4A0A075B652 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-4A0A075B652 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-4A0A075B652 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-4A0A075B652 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5-4A0A075B652 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 Gm11249-201ENSMUST00000117071 859 ntBASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 Gm15375-201ENSMUST00000119510 849 ntBASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5-4A0A075B652 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.33□□□□□ -0.11
Trav5-4A0A075B652 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav5-4A0A075B652 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav5-4A0A075B652 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav5-4A0A075B652 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.33□□□□□ -0.11
Trav5-4A0A075B652 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav5-4A0A075B652 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-4A0A075B652 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.33□□□□□ -0.12
Trav5-4A0A075B652 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-4A0A075B652 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-4A0A075B652 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-4A0A075B652 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-4A0A075B652 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-4A0A075B652 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-4A0A075B652 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Trav5-4A0A075B652 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-4A0A075B652 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-4A0A075B652 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-4A0A075B652 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav5-4A0A075B652 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-4A0A075B652 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-4A0A075B652 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-4A0A075B652 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-4A0A075B652 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Trav5-4A0A075B652 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.33□□□□□ -0.12
Trav5-4A0A075B652 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5-4A0A075B652 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms