Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Gm10033-202ENSMUST00000211874 928 ntBASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-6A0A075B603 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav6-6A0A075B603 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms