Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC7.2□□□□□ -1.26
COL6A2P12110 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL6A2P12110 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC7.2□□□□□ -1.26
COL6A2P12110 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC7.2□□□□□ -1.26
COL6A2P12110 AP006193.1-201ENST00000440724 485 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.2□□□□□ -1.26
COL6A2P12110 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC7.2□□□□□ -1.26
COL6A2P12110 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC7.2□□□□□ -1.26
COL6A2P12110 AC090954.1-201ENST00000445502 361 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC7.2□□□□□ -1.26
COL6A2P12110 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC7.2□□□□□ -1.26
COL6A2P12110 AC073072.2-201ENST00000447425 348 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 CDC42P2-201ENST00000448566 569 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 AC098828.2-201ENST00000452342 573 ntTSL 2 BASIC7.2□□□□□ -1.26
COL6A2P12110 AL122001.1-201ENST00000457027 370 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 SNORD11.1-201ENST00000459482 85 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 AC117395.2-201ENST00000463122 1128 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 RN7SL251P-201ENST00000464175 297 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC7.2□□□□□ -1.26
COL6A2P12110 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL6A2P12110 RN7SL608P-201ENST00000492377 279 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC7.2□□□□□ -1.26
COL6A2P12110 RPS10P20-201ENST00000494130 463 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.2□□□□□ -1.26
COL6A2P12110 RPL5P23-201ENST00000496040 868 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC7.2□□□□□ -1.26
COL6A2P12110 RNA5SP422-201ENST00000516778 111 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 RNU6-943P-201ENST00000516960 98 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 NPM1P52-201ENST00000518264 846 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 SEC11B-201ENST00000518383 499 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC7.2□□□□□ -1.26
COL6A2P12110 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.2□□□□□ -1.26
COL6A2P12110 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.2□□□□□ -1.26
COL6A2P12110 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
COL6A2P12110 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC7.2□□□□□ -1.26
COL6A2P12110 MYL6-211ENST00000548580 528 ntTSL 2 BASIC7.2□□□□□ -1.26
COL6A2P12110 MRPS36P5-201ENST00000551909 298 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC7.2□□□□□ -1.26
COL6A2P12110 MTCYBP27-201ENST00000555160 670 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7.2□□□□□ -1.26
COL6A2P12110 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC7.2□□□□□ -1.26
COL6A2P12110 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC7.2□□□□□ -1.26
COL6A2P12110 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC7.2□□□□□ -1.26
COL6A2P12110 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC7.2□□□□□ -1.26
COL6A2P12110 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC7.2□□□□□ -1.26
COL6A2P12110 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC7.2□□□□□ -1.26
COL6A2P12110 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC7.2□□□□□ -1.26
COL6A2P12110 AC020765.1-201ENST00000604296 328 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 AL353807.4-201ENST00000604995 257 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC7.2□□□□□ -1.26
COL6A2P12110 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC7.2□□□□□ -1.26
COL6A2P12110 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC7.2□□□□□ -1.26
COL6A2P12110 CYCSP41-201ENST00000616920 296 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL6A2P12110 GAS2-210ENST00000630668 674 ntTSL 5 BASIC7.2□□□□□ -1.26
COL6A2P12110 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC7.2□□□□□ -1.26
COL6A2P12110 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
COL6A2P12110 AC005839.1-201ENST00000624148 3213 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL6A2P12110 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL6A2P12110 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL6A2P12110 AC020978.6-201ENST00000571197 3177 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL6A2P12110 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL6A2P12110 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL6A2P12110 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.2□□□□□ -1.26
COL6A2P12110 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.2□□□□□ -1.26
COL6A2P12110 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL6A2P12110 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.19□□□□□ -1.26
COL6A2P12110 AL049869.1-201ENST00000556933 1402 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.19□□□□□ -1.26
COL6A2P12110 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL6A2P12110 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL6A2P12110 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.19□□□□□ -1.26
COL6A2P12110 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
COL6A2P12110 RNA5SP238-201ENST00000365464 120 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 MIR421-201ENST00000365696 85 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC7.19□□□□□ -1.26
COL6A2P12110 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
COL6A2P12110 RNA5SP18-201ENST00000390935 121 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL6A2P12110 RPSAP42-201ENST00000403415 878 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.19□□□□□ -1.26
COL6A2P12110 MED15P8-201ENST00000411601 545 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 TCEA1P2-201ENST00000420496 906 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 GAPDHP73-201ENST00000423411 1007 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 XKRYP1-201ENST00000423438 492 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 MTND4LP13-201ENST00000425022 298 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 AC092066.1-201ENST00000425131 317 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC7.19□□□□□ -1.26
COL6A2P12110 SNX18P14-201ENST00000429308 574 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 XKRYP2-201ENST00000432915 492 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC7.19□□□□□ -1.26
COL6A2P12110 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC7.19□□□□□ -1.26
COL6A2P12110 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC7.19□□□□□ -1.26
COL6A2P12110 AL009048.1-201ENST00000450437 298 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC7.19□□□□□ -1.26
COL6A2P12110 RSU1P1-201ENST00000453416 441 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 PSPC1P2-201ENST00000455130 225 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 AGKP1-201ENST00000455254 1263 ntBASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms