Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC027124.1-201ENST00000440852 466 ntBASIC6.26□□□□□ -1.41
SSX4O60224 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.26□□□□□ -1.41
SSX4O60224 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC6.26□□□□□ -1.41
SSX4O60224 AL354872.1-201ENST00000456361 967 ntBASIC6.26□□□□□ -1.41
SSX4O60224 RPLP0P1-201ENST00000457002 361 ntBASIC6.26□□□□□ -1.41
SSX4O60224 CREM-224ENST00000468236 582 ntTSL 3 BASIC6.26□□□□□ -1.41
SSX4O60224 AC131233.1-201ENST00000479200 955 ntBASIC6.26□□□□□ -1.41
SSX4O60224 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSX4O60224 RPL10P7-201ENST00000495649 625 ntBASIC6.26□□□□□ -1.41
SSX4O60224 CHCHD2P7-201ENST00000508008 452 ntBASIC6.26□□□□□ -1.41
SSX4O60224 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.26□□□□□ -1.41
SSX4O60224 AP001646.2-201ENST00000528645 1156 ntBASIC6.26□□□□□ -1.41
SSX4O60224 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC6.26□□□□□ -1.41
SSX4O60224 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.26□□□□□ -1.41
SSX4O60224 FXNP1-201ENST00000555153 337 ntBASIC6.26□□□□□ -1.41
SSX4O60224 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.26□□□□□ -1.41
SSX4O60224 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.26□□□□□ -1.41
SSX4O60224 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.26□□□□□ -1.41
SSX4O60224 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC6.26□□□□□ -1.41
SSX4O60224 AC090953.1-201ENST00000604305 1092 ntBASIC6.26□□□□□ -1.41
SSX4O60224 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.26□□□□□ -1.41
SSX4O60224 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.26□□□□□ -1.41
SSX4O60224 AL031777.2-201ENST00000611953 196 ntBASIC6.26□□□□□ -1.41
SSX4O60224 AP001885.1-201ENST00000621658 558 ntBASIC6.26□□□□□ -1.41
SSX4O60224 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSX4O60224 SNORA43.5-201ENST00000631270 138 ntBASIC6.26□□□□□ -1.41
SSX4O60224 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
SSX4O60224 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
SSX4O60224 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSX4O60224 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
SSX4O60224 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.26□□□□□ -1.41
SSX4O60224 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSX4O60224 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.26□□□□□ -1.41
SSX4O60224 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SSX4O60224 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.26□□□□□ -1.41
SSX4O60224 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSX4O60224 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SSX4O60224 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSX4O60224 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSX4O60224 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSX4O60224 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSX4O60224 AC233968.1-201ENST00000611212 1300 ntBASIC6.25□□□□□ -1.41
SSX4O60224 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSX4O60224 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSX4O60224 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.25□□□□□ -1.41
SSX4O60224 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSX4O60224 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSX4O60224 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.25□□□□□ -1.41
SSX4O60224 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSX4O60224 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.25□□□□□ -1.41
SSX4O60224 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSX4O60224 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.25□□□□□ -1.41
SSX4O60224 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.25□□□□□ -1.41
SSX4O60224 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSX4O60224 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSX4O60224 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.25□□□□□ -1.41
SSX4O60224 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
SSX4O60224 RPS3AP5-201ENST00000389400 821 ntBASIC6.25□□□□□ -1.41
SSX4O60224 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC6.25□□□□□ -1.41
SSX4O60224 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC6.25□□□□□ -1.41
SSX4O60224 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSX4O60224 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.25□□□□□ -1.41
SSX4O60224 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC6.25□□□□□ -1.41
SSX4O60224 OR7E117P-201ENST00000422682 1112 ntBASIC6.25□□□□□ -1.41
SSX4O60224 AC244505.2-201ENST00000435089 759 ntBASIC6.25□□□□□ -1.41
SSX4O60224 RPL5P27-201ENST00000437011 881 ntBASIC6.25□□□□□ -1.41
SSX4O60224 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC6.25□□□□□ -1.41
SSX4O60224 WBP1LP1-201ENST00000460451 896 ntBASIC6.25□□□□□ -1.41
SSX4O60224 RPL5P12-201ENST00000477071 851 ntBASIC6.25□□□□□ -1.41
SSX4O60224 RN7SL88P-201ENST00000480166 299 ntBASIC6.25□□□□□ -1.41
SSX4O60224 RPS4XP23-201ENST00000487801 237 ntBASIC6.25□□□□□ -1.41
SSX4O60224 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.25□□□□□ -1.41
SSX4O60224 AC063943.2-201ENST00000495697 534 ntBASIC6.25□□□□□ -1.41
SSX4O60224 RNU6-751P-201ENST00000516382 101 ntBASIC6.25□□□□□ -1.41
SSX4O60224 AC113191.1-201ENST00000517759 403 ntBASIC6.25□□□□□ -1.41
SSX4O60224 AC073581.1-201ENST00000519036 575 ntBASIC6.25□□□□□ -1.41
SSX4O60224 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.25□□□□□ -1.41
SSX4O60224 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.25□□□□□ -1.41
SSX4O60224 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SSX4O60224 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSX4O60224 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
SSX4O60224 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC6.25□□□□□ -1.41
SSX4O60224 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.25□□□□□ -1.41
SSX4O60224 AL109628.1-201ENST00000556877 366 ntBASIC6.25□□□□□ -1.41
SSX4O60224 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC6.25□□□□□ -1.41
SSX4O60224 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.25□□□□□ -1.41
SSX4O60224 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.25□□□□□ -1.41
SSX4O60224 AC211433.3-201ENST00000623770 375 ntBASIC6.25□□□□□ -1.41
SSX4O60224 AC006453.3-201ENST00000635891 377 ntBASIC6.25□□□□□ -1.41
SSX4O60224 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SSX4O60224 EEF1A1P26-201ENST00000458319 1363 ntBASIC6.25□□□□□ -1.41
SSX4O60224 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.25□□□□□ -1.41
SSX4O60224 MKI67P1-201ENST00000604297 1460 ntBASIC6.25□□□□□ -1.41
SSX4O60224 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
SSX4O60224 AP003471.1-202ENST00000319051 1988 ntBASIC6.25□□□□□ -1.41
SSX4O60224 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.25□□□□□ -1.41
SSX4O60224 TNPO1P2-201ENST00000426249 2665 ntBASIC6.25□□□□□ -1.41
SSX4O60224 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.25□□□□□ -1.41
SSX4O60224 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSX4O60224 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms