Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.74□□□□□ -1.49
CDX1P47902 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC5.74□□□□□ -1.49
CDX1P47902 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC5.74□□□□□ -1.49
CDX1P47902 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.74□□□□□ -1.49
CDX1P47902 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC5.74□□□□□ -1.49
CDX1P47902 ATP5J2P4-201ENST00000538774 267 ntBASIC5.74□□□□□ -1.49
CDX1P47902 EGLN3P1-201ENST00000541727 720 ntBASIC5.74□□□□□ -1.49
CDX1P47902 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.74□□□□□ -1.49
CDX1P47902 AC023310.2-201ENST00000553844 547 ntBASIC5.74□□□□□ -1.49
CDX1P47902 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC5.74□□□□□ -1.49
CDX1P47902 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC5.74□□□□□ -1.49
CDX1P47902 AC105275.2-201ENST00000567907 711 ntBASIC5.74□□□□□ -1.49
CDX1P47902 MED31-202ENST00000574128 619 ntTSL 3 BASIC5.74□□□□□ -1.49
CDX1P47902 MIR4420-201ENST00000583944 77 ntBASIC5.74□□□□□ -1.49
CDX1P47902 AC090774.2-201ENST00000584708 322 ntBASIC5.74□□□□□ -1.49
CDX1P47902 AC012640.3-201ENST00000607847 430 ntBASIC5.74□□□□□ -1.49
CDX1P47902 AC097381.3-201ENST00000608962 462 ntBASIC5.74□□□□□ -1.49
CDX1P47902 AL008582.1-201ENST00000609612 442 ntBASIC5.74□□□□□ -1.49
CDX1P47902 AL139123.1-201ENST00000612008 430 ntBASIC5.74□□□□□ -1.49
CDX1P47902 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC5.74□□□□□ -1.49
CDX1P47902 AL356752.1-201ENST00000615844 593 ntBASIC5.74□□□□□ -1.49
CDX1P47902 AL031658.2-201ENST00000616850 651 ntBASIC5.74□□□□□ -1.49
CDX1P47902 U1.41-201ENST00000617626 165 ntBASIC5.74□□□□□ -1.49
CDX1P47902 uc_338.37-201ENST00000620113 186 ntBASIC5.74□□□□□ -1.49
CDX1P47902 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC5.74□□□□□ -1.49
CDX1P47902 FKBP1AP4-201ENST00000631775 336 ntBASIC5.74□□□□□ -1.49
CDX1P47902 AC063952.1-203ENST00000634410 658 ntBASIC5.74□□□□□ -1.49
CDX1P47902 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC5.74□□□□□ -1.49
CDX1P47902 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC5.74□□□□□ -1.49
CDX1P47902 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.74□□□□□ -1.49
CDX1P47902 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.74□□□□□ -1.49
CDX1P47902 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CDX1P47902 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CDX1P47902 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.74□□□□□ -1.49
CDX1P47902 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CDX1P47902 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC5.74□□□□□ -1.49
CDX1P47902 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.74□□□□□ -1.49
CDX1P47902 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.74□□□□□ -1.49
CDX1P47902 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.74□□□□□ -1.49
CDX1P47902 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 MTCO1P8-201ENST00000416914 1523 ntBASIC5.74□□□□□ -1.49
CDX1P47902 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC5.74□□□□□ -1.49
CDX1P47902 WNK1-220ENST00000574564 1401 ntBASIC5.74□□□□□ -1.49
CDX1P47902 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC5.73□□□□□ -1.49
CDX1P47902 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
CDX1P47902 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDX1P47902 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDX1P47902 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
CDX1P47902 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
CDX1P47902 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDX1P47902 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDX1P47902 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
CDX1P47902 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDX1P47902 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CDX1P47902 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDX1P47902 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
CDX1P47902 AL117344.1-201ENST00000407196 616 ntBASIC5.73□□□□□ -1.49
CDX1P47902 SNORA3.1-201ENST00000408166 111 ntBASIC5.73□□□□□ -1.49
CDX1P47902 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC5.73□□□□□ -1.49
CDX1P47902 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC5.73□□□□□ -1.49
CDX1P47902 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.73□□□□□ -1.49
CDX1P47902 OR5P4P-201ENST00000424698 917 ntBASIC5.73□□□□□ -1.49
CDX1P47902 CYP4F32P-201ENST00000426492 504 ntBASIC5.73□□□□□ -1.49
CDX1P47902 AL138479.1-201ENST00000426913 484 ntBASIC5.73□□□□□ -1.49
CDX1P47902 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC5.73□□□□□ -1.49
CDX1P47902 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CDX1P47902 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC5.73□□□□□ -1.49
CDX1P47902 RPS14P7-201ENST00000473701 448 ntBASIC5.73□□□□□ -1.49
CDX1P47902 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDX1P47902 RN7SL153P-201ENST00000486501 292 ntBASIC5.73□□□□□ -1.49
CDX1P47902 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC5.73□□□□□ -1.49
CDX1P47902 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC5.73□□□□□ -1.49
CDX1P47902 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.73□□□□□ -1.49
CDX1P47902 RNU6-551P-201ENST00000516661 103 ntBASIC5.73□□□□□ -1.49
CDX1P47902 IGHVII-49-1-201ENST00000521760 224 ntBASIC5.73□□□□□ -1.49
CDX1P47902 OR4A6P-201ENST00000534364 970 ntBASIC5.73□□□□□ -1.49
CDX1P47902 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
CDX1P47902 EEF1A1P17-201ENST00000547505 1275 ntBASIC5.73□□□□□ -1.49
CDX1P47902 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC5.73□□□□□ -1.49
CDX1P47902 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
CDX1P47902 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC5.73□□□□□ -1.49
CDX1P47902 RN7SL42P-201ENST00000579786 294 ntBASIC5.73□□□□□ -1.49
CDX1P47902 AC061975.3-201ENST00000583209 244 ntBASIC5.73□□□□□ -1.49
CDX1P47902 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC5.73□□□□□ -1.49
CDX1P47902 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC5.73□□□□□ -1.49
CDX1P47902 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC5.73□□□□□ -1.49
CDX1P47902 AP001554.1-201ENST00000604533 376 ntBASIC5.73□□□□□ -1.49
CDX1P47902 AC138473.1-201ENST00000605717 526 ntBASIC5.73□□□□□ -1.49
CDX1P47902 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC5.73□□□□□ -1.49
CDX1P47902 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms