Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LIG1P18858 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC8.48□□□□□ -1.05
LIG1P18858 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC8.48□□□□□ -1.05
LIG1P18858 AC092685.1-201ENST00000447960 1243 ntBASIC8.48□□□□□ -1.05
LIG1P18858 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LIG1P18858 NPY6R-201ENST00000503807 1112 ntBASIC8.48□□□□□ -1.05
LIG1P18858 ATG10-AS1-201ENST00000504846 648 ntBASIC8.48□□□□□ -1.05
LIG1P18858 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC8.48□□□□□ -1.05
LIG1P18858 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC8.48□□□□□ -1.05
LIG1P18858 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC8.48□□□□□ -1.05
LIG1P18858 C1DP5-201ENST00000525775 383 ntBASIC8.48□□□□□ -1.05
LIG1P18858 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC8.48□□□□□ -1.05
LIG1P18858 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC8.48□□□□□ -1.05
LIG1P18858 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC8.48□□□□□ -1.05
LIG1P18858 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC8.48□□□□□ -1.05
LIG1P18858 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC8.48□□□□□ -1.05
LIG1P18858 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC8.48□□□□□ -1.05
LIG1P18858 HIGD1AP9-201ENST00000550710 279 ntBASIC8.48□□□□□ -1.05
LIG1P18858 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LIG1P18858 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LIG1P18858 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC8.48□□□□□ -1.05
LIG1P18858 AC005632.2-201ENST00000564271 828 ntBASIC8.48□□□□□ -1.05
LIG1P18858 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC8.48□□□□□ -1.05
LIG1P18858 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC8.48□□□□□ -1.05
LIG1P18858 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC8.48□□□□□ -1.05
LIG1P18858 AL022161.1-201ENST00000604390 213 ntBASIC8.48□□□□□ -1.05
LIG1P18858 AC117490.2-201ENST00000610042 594 ntBASIC8.48□□□□□ -1.05
LIG1P18858 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC8.48□□□□□ -1.05
LIG1P18858 IGKV1OR1-1-201ENST00000613775 347 ntBASIC8.48□□□□□ -1.05
LIG1P18858 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LIG1P18858 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LIG1P18858 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LIG1P18858 AC034111.1-201ENST00000562143 3770 ntBASIC8.48□□□□□ -1.05
LIG1P18858 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
LIG1P18858 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LIG1P18858 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC8.48□□□□□ -1.05
LIG1P18858 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC8.47□□□□□ -1.05
LIG1P18858 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC8.47□□□□□ -1.05
LIG1P18858 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC8.47□□□□□ -1.05
LIG1P18858 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC8.47□□□□□ -1.05
LIG1P18858 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
LIG1P18858 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
LIG1P18858 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC8.47□□□□□ -1.05
LIG1P18858 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
LIG1P18858 TMEM161BP1-201ENST00000457388 1457 ntBASIC8.47□□□□□ -1.05
LIG1P18858 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
LIG1P18858 AL080312.1-201ENST00000256654 824 ntBASIC8.47□□□□□ -1.05
LIG1P18858 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
LIG1P18858 PPIAP22-201ENST00000358455 498 ntBASIC8.47□□□□□ -1.05
LIG1P18858 RNA5SP448-201ENST00000363151 111 ntBASIC8.47□□□□□ -1.05
LIG1P18858 PPCS-204ENST00000372562 966 ntTSL 2 BASIC8.47□□□□□ -1.05
LIG1P18858 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
LIG1P18858 RN7SKP39-201ENST00000410773 322 ntBASIC8.47□□□□□ -1.05
LIG1P18858 AC023141.10-201ENST00000415634 200 ntBASIC8.47□□□□□ -1.05
LIG1P18858 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC8.47□□□□□ -1.05
LIG1P18858 USP9YP14-201ENST00000430663 563 ntBASIC8.47□□□□□ -1.05
LIG1P18858 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC8.47□□□□□ -1.05
LIG1P18858 BX119917.1-201ENST00000432517 502 ntBASIC8.47□□□□□ -1.05
LIG1P18858 RPL7P34-201ENST00000433316 712 ntBASIC8.47□□□□□ -1.05
LIG1P18858 RPS21P1-201ENST00000434479 247 ntBASIC8.47□□□□□ -1.05
LIG1P18858 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC8.47□□□□□ -1.05
LIG1P18858 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC8.47□□□□□ -1.05
LIG1P18858 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC8.47□□□□□ -1.05
LIG1P18858 MTND1P29-201ENST00000448112 647 ntBASIC8.47□□□□□ -1.05
LIG1P18858 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC8.47□□□□□ -1.05
LIG1P18858 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LIG1P18858 RPS18P13-201ENST00000461260 454 ntBASIC8.47□□□□□ -1.05
LIG1P18858 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC8.47□□□□□ -1.05
LIG1P18858 AC026336.1-201ENST00000466577 351 ntBASIC8.47□□□□□ -1.05
LIG1P18858 RN7SL282P-201ENST00000479676 297 ntBASIC8.47□□□□□ -1.05
LIG1P18858 RN7SL332P-201ENST00000482163 254 ntBASIC8.47□□□□□ -1.05
LIG1P18858 AC020699.1-201ENST00000505161 445 ntBASIC8.47□□□□□ -1.05
LIG1P18858 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC8.47□□□□□ -1.05
LIG1P18858 OR7E2P-201ENST00000533071 889 ntBASIC8.47□□□□□ -1.05
LIG1P18858 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC8.47□□□□□ -1.05
LIG1P18858 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
LIG1P18858 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC8.47□□□□□ -1.05
LIG1P18858 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LIG1P18858 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC8.47□□□□□ -1.05
LIG1P18858 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC8.47□□□□□ -1.05
LIG1P18858 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC8.47□□□□□ -1.05
LIG1P18858 AP005136.2-201ENST00000583253 1049 ntBASIC8.47□□□□□ -1.05
LIG1P18858 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC8.47□□□□□ -1.05
LIG1P18858 NDUFA3P1-201ENST00000588007 252 ntBASIC8.47□□□□□ -1.05
LIG1P18858 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC8.47□□□□□ -1.05
LIG1P18858 Z94722.1-201ENST00000604328 474 ntBASIC8.47□□□□□ -1.05
LIG1P18858 AC004852.1-201ENST00000605206 154 ntBASIC8.47□□□□□ -1.05
LIG1P18858 AL512413.1-201ENST00000606489 382 ntBASIC8.47□□□□□ -1.05
LIG1P18858 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC8.47□□□□□ -1.05
LIG1P18858 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LIG1P18858 AC023310.4-201ENST00000613130 650 ntBASIC8.47□□□□□ -1.05
LIG1P18858 AL353898.2-201ENST00000623000 255 ntBASIC8.47□□□□□ -1.05
LIG1P18858 AC068880.4-201ENST00000623082 495 ntBASIC8.47□□□□□ -1.05
LIG1P18858 AC097460.3-201ENST00000623099 442 ntBASIC8.47□□□□□ -1.05
LIG1P18858 AC130448.2-201ENST00000624082 374 ntBASIC8.47□□□□□ -1.05
LIG1P18858 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC8.47□□□□□ -1.05
LIG1P18858 AC233280.20-201ENST00000637412 416 ntBASIC8.47□□□□□ -1.05
LIG1P18858 AC132825.7-201ENST00000638744 335 ntBASIC8.47□□□□□ -1.05
LIG1P18858 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC8.47□□□□□ -1.05
LIG1P18858 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms