Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 EEF1A1P22-201ENST00000559385 1380 ntBASIC5.81□□□□□ -1.48
CDX1P47902 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.81□□□□□ -1.48
CDX1P47902 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC5.81□□□□□ -1.48
CDX1P47902 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC5.81□□□□□ -1.48
CDX1P47902 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDX1P47902 MAPK10-287ENST00000641217 3037 ntBASIC5.81□□□□□ -1.48
CDX1P47902 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDX1P47902 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDX1P47902 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDX1P47902 AL157713.1-201ENST00000379752 1531 ntBASIC5.81□□□□□ -1.48
CDX1P47902 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC5.81□□□□□ -1.48
CDX1P47902 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC5.81□□□□□ -1.48
CDX1P47902 MIR498-201ENST00000385134 124 ntBASIC5.81□□□□□ -1.48
CDX1P47902 RPL12P10-201ENST00000413498 498 ntBASIC5.81□□□□□ -1.48
CDX1P47902 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC5.81□□□□□ -1.48
CDX1P47902 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CDX1P47902 RPSAP1-201ENST00000421328 880 ntBASIC5.81□□□□□ -1.48
CDX1P47902 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC5.81□□□□□ -1.48
CDX1P47902 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CDX1P47902 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC5.81□□□□□ -1.48
CDX1P47902 OR52U1P-201ENST00000439752 923 ntBASIC5.81□□□□□ -1.48
CDX1P47902 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC5.81□□□□□ -1.48
CDX1P47902 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC5.81□□□□□ -1.48
CDX1P47902 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDX1P47902 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC5.81□□□□□ -1.48
CDX1P47902 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDX1P47902 AL390026.1-201ENST00000456647 457 ntBASIC5.81□□□□□ -1.48
CDX1P47902 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC5.81□□□□□ -1.48
CDX1P47902 AC005550.2-201ENST00000476382 318 ntBASIC5.81□□□□□ -1.48
CDX1P47902 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC5.81□□□□□ -1.48
CDX1P47902 AC008799.2-201ENST00000484429 647 ntBASIC5.81□□□□□ -1.48
CDX1P47902 NPY6R-201ENST00000503807 1112 ntBASIC5.81□□□□□ -1.48
CDX1P47902 LINC00992-201ENST00000504107 617 ntTSL 2 BASIC5.81□□□□□ -1.48
CDX1P47902 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC5.81□□□□□ -1.48
CDX1P47902 AC233724.10-201ENST00000510454 409 ntBASIC5.81□□□□□ -1.48
CDX1P47902 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.81□□□□□ -1.48
CDX1P47902 RNU6-943P-201ENST00000516960 98 ntBASIC5.81□□□□□ -1.48
CDX1P47902 AC073581.1-201ENST00000519036 575 ntBASIC5.81□□□□□ -1.48
CDX1P47902 AP004607.6-201ENST00000525033 1202 ntBASIC5.81□□□□□ -1.48
CDX1P47902 AP001994.1-201ENST00000527539 826 ntBASIC5.81□□□□□ -1.48
CDX1P47902 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC5.81□□□□□ -1.48
CDX1P47902 AL356800.1-201ENST00000553339 735 ntBASIC5.81□□□□□ -1.48
CDX1P47902 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.81□□□□□ -1.48
CDX1P47902 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC5.81□□□□□ -1.48
CDX1P47902 OOSP1P2-201ENST00000579644 351 ntBASIC5.81□□□□□ -1.48
CDX1P47902 RN7SL697P-201ENST00000582484 299 ntBASIC5.81□□□□□ -1.48
CDX1P47902 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC5.81□□□□□ -1.48
CDX1P47902 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.81□□□□□ -1.48
CDX1P47902 AC108451.2-201ENST00000603875 538 ntBASIC5.81□□□□□ -1.48
CDX1P47902 AC096586.2-201ENST00000610260 441 ntBASIC5.81□□□□□ -1.48
CDX1P47902 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC5.81□□□□□ -1.48
CDX1P47902 AC107905.1-201ENST00000616204 426 ntBASIC5.81□□□□□ -1.48
CDX1P47902 pRNA.9-201ENST00000618609 89 ntBASIC5.81□□□□□ -1.48
CDX1P47902 AC243960.7-201ENST00000623532 707 ntBASIC5.81□□□□□ -1.48
CDX1P47902 SNORA43.5-201ENST00000631270 138 ntBASIC5.81□□□□□ -1.48
CDX1P47902 AC241377.2-202ENST00000636462 997 ntBASIC5.81□□□□□ -1.48
CDX1P47902 FGL2-202ENST00000637771 989 ntBASIC5.81□□□□□ -1.48
CDX1P47902 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDX1P47902 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDX1P47902 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDX1P47902 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDX1P47902 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDX1P47902 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDX1P47902 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDX1P47902 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CDX1P47902 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDX1P47902 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDX1P47902 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.8□□□□□ -1.48
CDX1P47902 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.8□□□□□ -1.48
CDX1P47902 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.8□□□□□ -1.48
CDX1P47902 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDX1P47902 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDX1P47902 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDX1P47902 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC5.8□□□□□ -1.48
CDX1P47902 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDX1P47902 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDX1P47902 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDX1P47902 RNA5SP512-201ENST00000364550 120 ntBASIC5.8□□□□□ -1.48
CDX1P47902 RNA5SP396-201ENST00000364834 120 ntBASIC5.8□□□□□ -1.48
CDX1P47902 RNU1-122P-201ENST00000365538 156 ntBASIC5.8□□□□□ -1.48
CDX1P47902 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CDX1P47902 NXT2-204ENST00000372107 937 ntTSL 3 BASIC5.8□□□□□ -1.48
CDX1P47902 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDX1P47902 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC5.8□□□□□ -1.48
CDX1P47902 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC5.8□□□□□ -1.48
CDX1P47902 AC231533.2-201ENST00000419045 978 ntBASIC5.8□□□□□ -1.48
CDX1P47902 RFESDP1-201ENST00000422350 461 ntBASIC5.8□□□□□ -1.48
CDX1P47902 PPIL1P1-201ENST00000423936 499 ntBASIC5.8□□□□□ -1.48
CDX1P47902 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC5.8□□□□□ -1.48
CDX1P47902 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC5.8□□□□□ -1.48
CDX1P47902 NIP7P1-201ENST00000433227 512 ntBASIC5.8□□□□□ -1.48
CDX1P47902 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.8□□□□□ -1.48
CDX1P47902 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC5.8□□□□□ -1.48
CDX1P47902 AC018892.2-201ENST00000457656 693 ntBASIC5.8□□□□□ -1.48
CDX1P47902 RNU6-775P-201ENST00000459318 96 ntBASIC5.8□□□□□ -1.48
CDX1P47902 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC5.8□□□□□ -1.48
CDX1P47902 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC5.8□□□□□ -1.48
CDX1P47902 OSTC-204ENST00000512478 663 ntTSL 5 BASIC5.8□□□□□ -1.48
CDX1P47902 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.8□□□□□ -1.48
CDX1P47902 KCTD9P6-201ENST00000522306 950 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms