Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 AC004023.1-201ENST00000561473 1744 ntBASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 SPATA31C1-201ENST00000420021 3895 ntBASIC6.38□□□□□ -1.39
NPIPA3F8WFD2 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 AC073342.2-201ENST00000595842 1800 ntBASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 AC079248.1-201ENST00000427568 1546 ntBASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 FAM204BP-201ENST00000369171 701 ntBASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 AC006511.2-201ENST00000388966 660 ntBASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 RN7SKP254-201ENST00000410685 310 ntBASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 RPL3P11-201ENST00000434028 1146 ntBASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 SUMO2P8-201ENST00000434672 286 ntBASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 AL022324.2-201ENST00000434827 780 ntBASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 AC013403.1-201ENST00000436954 263 ntBASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 GOT2P2-201ENST00000450663 1251 ntBASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 BX323845.2-201ENST00000458382 234 ntBASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 SNORA81.1-201ENST00000458922 177 ntBASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 RN7SL372P-201ENST00000461982 298 ntBASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 RN7SL259P-201ENST00000478499 253 ntBASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 RN7SL350P-201ENST00000492591 299 ntBASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 BLNK-209ENST00000495266 440 ntTSL 5 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 AC146944.2-201ENST00000504546 1073 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 AC139495.1-201ENST00000510264 1073 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 AC079866.1-201ENST00000534985 1220 ntBASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 AC026458.1-201ENST00000564330 438 ntBASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 RN7SL66P-201ENST00000582099 264 ntBASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 AC011447.2-201ENST00000592921 283 ntBASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 AC127071.1-201ENST00000624997 712 ntBASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 AC183089.2-201ENST00000637931 916 ntBASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 AC107980.1-201ENST00000558671 3355 ntBASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NPIPA3F8WFD2 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 AC009166.2-201ENST00000624410 2833 ntBASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 ZNF812P-201ENST00000457674 1694 ntBASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 TRIM53CP-201ENST00000531490 1354 ntBASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 MIR551B-201ENST00000384984 96 ntBASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 RNA5SP176-201ENST00000390956 110 ntBASIC6.36□□□□□ -1.39
NPIPA3F8WFD2 AL590762.1-201ENST00000391782 432 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 328.2 ms