Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SNX18Q96RF0 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SNX18Q96RF0 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SNX18Q96RF0 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SNX18Q96RF0 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SNX18Q96RF0 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 RNA5SP218-201ENST00000363188 109 ntBASIC6.59□□□□□ -1.35
SNX18Q96RF0 SNORA30B-201ENST00000365319 129 ntBASIC6.59□□□□□ -1.35
SNX18Q96RF0 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SNX18Q96RF0 RBBP4P4-201ENST00000398588 1289 ntBASIC6.59□□□□□ -1.35
SNX18Q96RF0 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 AC020983.1-201ENST00000417063 543 ntBASIC6.59□□□□□ -1.35
SNX18Q96RF0 EEF1A1P34-201ENST00000419888 1267 ntBASIC6.59□□□□□ -1.35
SNX18Q96RF0 AL590762.3-201ENST00000436372 640 ntBASIC6.59□□□□□ -1.35
SNX18Q96RF0 MRPS21P3-201ENST00000436696 262 ntBASIC6.59□□□□□ -1.35
SNX18Q96RF0 AC108039.2-201ENST00000440214 359 ntBASIC6.59□□□□□ -1.35
SNX18Q96RF0 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 AC040975.1-201ENST00000472104 316 ntBASIC6.59□□□□□ -1.35
SNX18Q96RF0 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SNX18Q96RF0 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 AC095057.1-201ENST00000507583 168 ntBASIC6.59□□□□□ -1.35
SNX18Q96RF0 AC112225.1-201ENST00000508230 297 ntBASIC6.59□□□□□ -1.35
SNX18Q96RF0 AC026700.1-201ENST00000512074 544 ntBASIC6.59□□□□□ -1.35
SNX18Q96RF0 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 AC027801.3-201ENST00000515049 698 ntBASIC6.59□□□□□ -1.35
SNX18Q96RF0 AC021733.2-201ENST00000518830 497 ntBASIC6.59□□□□□ -1.35
SNX18Q96RF0 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 OR4A13P-201ENST00000529316 942 ntBASIC6.59□□□□□ -1.35
SNX18Q96RF0 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 OR6M3P-201ENST00000531567 700 ntBASIC6.59□□□□□ -1.35
SNX18Q96RF0 AL136520.1-202ENST00000555494 763 ntBASIC6.59□□□□□ -1.35
SNX18Q96RF0 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 MTND2P13-201ENST00000577438 1039 ntBASIC6.59□□□□□ -1.35
SNX18Q96RF0 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 SNORA35B-201ENST00000607417 129 ntBASIC6.59□□□□□ -1.35
SNX18Q96RF0 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SNX18Q96RF0 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 FO681491.1-202ENST00000623392 737 ntBASIC6.59□□□□□ -1.35
SNX18Q96RF0 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
SNX18Q96RF0 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.59□□□□□ -1.35
SNX18Q96RF0 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.59□□□□□ -1.35
SNX18Q96RF0 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.59□□□□□ -1.36
SNX18Q96RF0 AC073365.1-203ENST00000641055 1992 ntBASIC6.58□□□□□ -1.36
SNX18Q96RF0 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SNX18Q96RF0 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SNX18Q96RF0 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SNX18Q96RF0 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SNX18Q96RF0 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SNX18Q96RF0 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SNX18Q96RF0 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
SNX18Q96RF0 AL078621.1-201ENST00000272567 768 ntBASIC6.58□□□□□ -1.36
SNX18Q96RF0 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SNX18Q96RF0 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 RPL7P58-201ENST00000402913 758 ntBASIC6.58□□□□□ -1.36
SNX18Q96RF0 GABARAPL3-201ENST00000412799 354 ntBASIC6.58□□□□□ -1.36
SNX18Q96RF0 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 AC000362.1-201ENST00000433725 425 ntBASIC6.58□□□□□ -1.36
SNX18Q96RF0 ATP5LP4-201ENST00000434169 307 ntBASIC6.58□□□□□ -1.36
SNX18Q96RF0 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SNX18Q96RF0 SCAND3P1-201ENST00000439854 1060 ntBASIC6.58□□□□□ -1.36
SNX18Q96RF0 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 HIST1H2APS6-201ENST00000448609 364 ntBASIC6.58□□□□□ -1.36
SNX18Q96RF0 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 VN1R6P-201ENST00000458417 907 ntBASIC6.58□□□□□ -1.36
SNX18Q96RF0 RN7SL325P-201ENST00000460434 283 ntBASIC6.58□□□□□ -1.36
SNX18Q96RF0 AP002371.1-201ENST00000463604 433 ntBASIC6.58□□□□□ -1.36
SNX18Q96RF0 AC084878.1-201ENST00000480555 648 ntBASIC6.58□□□□□ -1.36
SNX18Q96RF0 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SNX18Q96RF0 RNU6-964P-201ENST00000516524 69 ntBASIC6.58□□□□□ -1.36
SNX18Q96RF0 SNORA81.2-201ENST00000516868 170 ntBASIC6.58□□□□□ -1.36
SNX18Q96RF0 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.58□□□□□ -1.36
SNX18Q96RF0 AC004232.2-201ENST00000574245 821 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms