Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CEACAM3P40198 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CEACAM3P40198 AP000547.3-204ENST00000588548 2523 ntBASIC5.8□□□□□ -1.48
CEACAM3P40198 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CEACAM3P40198 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC5.8□□□□□ -1.48
CEACAM3P40198 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CEACAM3P40198 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.8□□□□□ -1.48
CEACAM3P40198 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC5.8□□□□□ -1.48
CEACAM3P40198 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
CEACAM3P40198 EEF1A1P20-201ENST00000514852 1386 ntBASIC5.8□□□□□ -1.48
CEACAM3P40198 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.8□□□□□ -1.48
CEACAM3P40198 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.8□□□□□ -1.48
CEACAM3P40198 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 MFSD8-217ENST00000641178 4374 ntBASIC5.79□□□□□ -1.48
CEACAM3P40198 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 AP004289.1-201ENST00000436307 2205 ntBASIC5.79□□□□□ -1.48
CEACAM3P40198 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.79□□□□□ -1.48
CEACAM3P40198 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC5.79□□□□□ -1.48
CEACAM3P40198 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.79□□□□□ -1.48
CEACAM3P40198 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC5.79□□□□□ -1.48
CEACAM3P40198 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.79□□□□□ -1.48
CEACAM3P40198 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC5.79□□□□□ -1.48
CEACAM3P40198 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CEACAM3P40198 RNA5SP472-201ENST00000363868 119 ntBASIC5.79□□□□□ -1.48
CEACAM3P40198 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 AC006511.2-201ENST00000388966 660 ntBASIC5.79□□□□□ -1.48
CEACAM3P40198 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC5.79□□□□□ -1.48
CEACAM3P40198 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.79□□□□□ -1.48
CEACAM3P40198 AL773545.3-201ENST00000414297 706 ntBASIC5.79□□□□□ -1.48
CEACAM3P40198 NRIR-202ENST00000414795 506 ntTSL 3 BASIC5.79□□□□□ -1.48
CEACAM3P40198 AC017078.1-201ENST00000416146 368 ntBASIC5.79□□□□□ -1.48
CEACAM3P40198 VDAC1P10-201ENST00000416715 891 ntBASIC5.79□□□□□ -1.48
CEACAM3P40198 HCG25-217ENST00000422366 702 ntTSL 3 BASIC5.79□□□□□ -1.48
CEACAM3P40198 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC5.79□□□□□ -1.48
CEACAM3P40198 BX119917.1-201ENST00000432517 502 ntBASIC5.79□□□□□ -1.48
CEACAM3P40198 SDHCP3-201ENST00000445371 506 ntBASIC5.79□□□□□ -1.48
CEACAM3P40198 CYCSP44-201ENST00000448560 313 ntBASIC5.79□□□□□ -1.48
CEACAM3P40198 AL929410.2-201ENST00000451170 189 ntBASIC5.79□□□□□ -1.48
CEACAM3P40198 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC5.79□□□□□ -1.48
CEACAM3P40198 AC117395.2-201ENST00000463122 1128 ntBASIC5.79□□□□□ -1.48
CEACAM3P40198 RPL5P15-201ENST00000475870 897 ntBASIC5.79□□□□□ -1.48
CEACAM3P40198 AC023818.1-201ENST00000498379 384 ntBASIC5.79□□□□□ -1.48
CEACAM3P40198 SCARNA18.2-201ENST00000516882 84 ntBASIC5.79□□□□□ -1.48
CEACAM3P40198 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.79□□□□□ -1.48
CEACAM3P40198 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC5.79□□□□□ -1.48
CEACAM3P40198 OR5M4P-201ENST00000529436 925 ntBASIC5.79□□□□□ -1.48
CEACAM3P40198 OR4C1P-201ENST00000530880 937 ntBASIC5.79□□□□□ -1.48
CEACAM3P40198 OR4A1P-201ENST00000532342 920 ntBASIC5.79□□□□□ -1.48
CEACAM3P40198 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.79□□□□□ -1.48
CEACAM3P40198 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC5.79□□□□□ -1.48
CEACAM3P40198 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC5.79□□□□□ -1.48
CEACAM3P40198 FRG2IP-201ENST00000563581 781 ntBASIC5.79□□□□□ -1.48
CEACAM3P40198 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 AL513218.1-201ENST00000606527 391 ntBASIC5.79□□□□□ -1.48
CEACAM3P40198 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC5.79□□□□□ -1.48
CEACAM3P40198 AC016542.3-201ENST00000623520 619 ntBASIC5.79□□□□□ -1.48
CEACAM3P40198 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CEACAM3P40198 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC5.79□□□□□ -1.48
CEACAM3P40198 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CEACAM3P40198 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC5.79□□□□□ -1.48
CEACAM3P40198 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CEACAM3P40198 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC5.79□□□□□ -1.48
CEACAM3P40198 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CEACAM3P40198 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CEACAM3P40198 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC5.79□□□□□ -1.48
CEACAM3P40198 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.78□□□□□ -1.48
CEACAM3P40198 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CEACAM3P40198 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CEACAM3P40198 AL078595.2-201ENST00000605309 1780 ntBASIC5.78□□□□□ -1.48
CEACAM3P40198 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC5.78□□□□□ -1.48
CEACAM3P40198 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CEACAM3P40198 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CEACAM3P40198 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CEACAM3P40198 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CEACAM3P40198 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CEACAM3P40198 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CEACAM3P40198 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CEACAM3P40198 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC5.78□□□□□ -1.48
CEACAM3P40198 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms