Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.52■□□□□ 0.4
Speer3W4VSP1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Speer3W4VSP1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.52■□□□□ 0.4
Speer3W4VSP1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Speer3W4VSP1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Speer3W4VSP1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Speer3W4VSP1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Speer3W4VSP1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Speer3W4VSP1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Speer3W4VSP1 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.52■□□□□ 0.39
Speer3W4VSP1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Speer3W4VSP1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Speer3W4VSP1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Speer3W4VSP1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Speer3W4VSP1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Speer3W4VSP1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Speer3W4VSP1 Gm2399-201ENSMUST00000104944 225 ntBASIC17.51■□□□□ 0.39
Speer3W4VSP1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Speer3W4VSP1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Speer3W4VSP1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Speer3W4VSP1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.51■□□□□ 0.39
Speer3W4VSP1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Speer3W4VSP1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Speer3W4VSP1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Speer3W4VSP1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Speer3W4VSP1 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Speer3W4VSP1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Speer3W4VSP1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Speer3W4VSP1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Speer3W4VSP1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.51■□□□□ 0.39
Speer3W4VSP1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Speer3W4VSP1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Speer3W4VSP1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Speer3W4VSP1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Speer3W4VSP1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.5■□□□□ 0.39
Speer3W4VSP1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Speer3W4VSP1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Speer3W4VSP1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Speer3W4VSP1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Speer3W4VSP1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Speer3W4VSP1 Gm26524-201ENSMUST00000192339 390 ntBASIC17.5■□□□□ 0.39
Speer3W4VSP1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Speer3W4VSP1 Gm44549-201ENSMUST00000208351 577 ntBASIC17.5■□□□□ 0.39
Speer3W4VSP1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.5■□□□□ 0.39
Speer3W4VSP1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Speer3W4VSP1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Speer3W4VSP1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.5■□□□□ 0.39
Speer3W4VSP1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Speer3W4VSP1 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Speer3W4VSP1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Speer3W4VSP1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Speer3W4VSP1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Speer3W4VSP1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Speer3W4VSP1 Haglr-201ENSMUST00000100000 2085 ntBASIC17.49■□□□□ 0.39
Speer3W4VSP1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Speer3W4VSP1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Speer3W4VSP1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Speer3W4VSP1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Speer3W4VSP1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Speer3W4VSP1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Speer3W4VSP1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Speer3W4VSP1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Speer3W4VSP1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Speer3W4VSP1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Speer3W4VSP1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Speer3W4VSP1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Speer3W4VSP1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Speer3W4VSP1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Speer3W4VSP1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Speer3W4VSP1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Speer3W4VSP1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Speer3W4VSP1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Speer3W4VSP1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Speer3W4VSP1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Speer3W4VSP1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Speer3W4VSP1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Speer3W4VSP1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.48■□□□□ 0.39
Speer3W4VSP1 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.48■□□□□ 0.39
Speer3W4VSP1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Speer3W4VSP1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Speer3W4VSP1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Speer3W4VSP1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Speer3W4VSP1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Speer3W4VSP1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Speer3W4VSP1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Speer3W4VSP1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Speer3W4VSP1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Speer3W4VSP1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Speer3W4VSP1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Speer3W4VSP1 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Speer3W4VSP1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Speer3W4VSP1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Speer3W4VSP1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
Speer3W4VSP1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Speer3W4VSP1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Speer3W4VSP1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Speer3W4VSP1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.47■□□□□ 0.39
Speer3W4VSP1 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Speer3W4VSP1 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.47■□□□□ 0.39
Speer3W4VSP1 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms