Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.79■□□□□ 0.28
Cdh17Q9R100 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh17Q9R100 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.79■□□□□ 0.28
Cdh17Q9R100 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.79■□□□□ 0.28
Cdh17Q9R100 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh17Q9R100 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh17Q9R100 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.79■□□□□ 0.28
Cdh17Q9R100 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh17Q9R100 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh17Q9R100 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh17Q9R100 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh17Q9R100 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.79■□□□□ 0.28
Cdh17Q9R100 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh17Q9R100 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cdh17Q9R100 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh17Q9R100 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh17Q9R100 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cdh17Q9R100 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh17Q9R100 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.78■□□□□ 0.28
Cdh17Q9R100 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh17Q9R100 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Cdh17Q9R100 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh17Q9R100 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.78■□□□□ 0.28
Cdh17Q9R100 Gm20049-201ENSMUST00000219950 730 ntBASIC16.78■□□□□ 0.28
Cdh17Q9R100 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh17Q9R100 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh17Q9R100 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh17Q9R100 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh17Q9R100 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh17Q9R100 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh17Q9R100 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh17Q9R100 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cdh17Q9R100 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Cdh17Q9R100 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.77■□□□□ 0.28
Cdh17Q9R100 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh17Q9R100 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh17Q9R100 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.77■□□□□ 0.28
Cdh17Q9R100 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.77■□□□□ 0.28
Cdh17Q9R100 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Cdh17Q9R100 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.77■□□□□ 0.28
Cdh17Q9R100 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh17Q9R100 Gm37292-201ENSMUST00000192062 758 ntBASIC16.77■□□□□ 0.28
Cdh17Q9R100 Gm4974-201ENSMUST00000209974 875 ntBASIC16.77■□□□□ 0.28
Cdh17Q9R100 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh17Q9R100 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh17Q9R100 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdh17Q9R100 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Cdh17Q9R100 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdh17Q9R100 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdh17Q9R100 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cdh17Q9R100 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh17Q9R100 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh17Q9R100 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cdh17Q9R100 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh17Q9R100 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh17Q9R100 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cdh17Q9R100 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh17Q9R100 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cdh17Q9R100 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh17Q9R100 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh17Q9R100 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Cdh17Q9R100 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.76■□□□□ 0.27
Cdh17Q9R100 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.76■□□□□ 0.27
Cdh17Q9R100 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.76■□□□□ 0.27
Cdh17Q9R100 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh17Q9R100 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cdh17Q9R100 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh17Q9R100 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh17Q9R100 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh17Q9R100 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cdh17Q9R100 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh17Q9R100 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh17Q9R100 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh17Q9R100 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Cdh17Q9R100 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh17Q9R100 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh17Q9R100 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh17Q9R100 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh17Q9R100 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh17Q9R100 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh17Q9R100 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh17Q9R100 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh17Q9R100 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh17Q9R100 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cdh17Q9R100 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh17Q9R100 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh17Q9R100 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh17Q9R100 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh17Q9R100 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh17Q9R100 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh17Q9R100 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.74■□□□□ 0.27
Cdh17Q9R100 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh17Q9R100 Gm12382-201ENSMUST00000122005 922 ntBASIC16.74■□□□□ 0.27
Cdh17Q9R100 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh17Q9R100 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh17Q9R100 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh17Q9R100 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh17Q9R100 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Cdh17Q9R100 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh17Q9R100 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms