Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-4Q9EQM3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-4Q9EQM3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-4Q9EQM3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-4Q9EQM3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-4Q9EQM3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-4Q9EQM3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-4Q9EQM3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-4Q9EQM3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-4Q9EQM3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-4Q9EQM3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nkx2-4Q9EQM3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.63■□□□□ 0.41
Nkx2-4Q9EQM3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-4Q9EQM3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Nkx2-4Q9EQM3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.63■□□□□ 0.41
Nkx2-4Q9EQM3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Nkx2-4Q9EQM3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nkx2-4Q9EQM3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Nkx2-4Q9EQM3 Gm7862-201ENSMUST00000121461 292 ntBASIC17.63■□□□□ 0.41
Nkx2-4Q9EQM3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-4Q9EQM3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.63■□□□□ 0.41
Nkx2-4Q9EQM3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-4Q9EQM3 Gm6296-201ENSMUST00000222599 943 ntBASIC17.63■□□□□ 0.41
Nkx2-4Q9EQM3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-4Q9EQM3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-4Q9EQM3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-4Q9EQM3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Nkx2-4Q9EQM3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-4Q9EQM3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.63■□□□□ 0.41
Nkx2-4Q9EQM3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-4Q9EQM3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Nkx2-4Q9EQM3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-4Q9EQM3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-4Q9EQM3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-4Q9EQM3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-4Q9EQM3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-4Q9EQM3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-4Q9EQM3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-4Q9EQM3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Nkx2-4Q9EQM3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.62■□□□□ 0.41
Nkx2-4Q9EQM3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.62■□□□□ 0.41
Nkx2-4Q9EQM3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-4Q9EQM3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.62■□□□□ 0.41
Nkx2-4Q9EQM3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Nkx2-4Q9EQM3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-4Q9EQM3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-4Q9EQM3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.62■□□□□ 0.41
Nkx2-4Q9EQM3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-4Q9EQM3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-4Q9EQM3 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.62■□□□□ 0.41
Nkx2-4Q9EQM3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.62■□□□□ 0.41
Nkx2-4Q9EQM3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-4Q9EQM3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-4Q9EQM3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Nkx2-4Q9EQM3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-4Q9EQM3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-4Q9EQM3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-4Q9EQM3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Nkx2-4Q9EQM3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-4Q9EQM3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-4Q9EQM3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-4Q9EQM3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-4Q9EQM3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.61■□□□□ 0.41
Nkx2-4Q9EQM3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
Nkx2-4Q9EQM3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.61■□□□□ 0.41
Nkx2-4Q9EQM3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-4Q9EQM3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-4Q9EQM3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-4Q9EQM3 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-4Q9EQM3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Nkx2-4Q9EQM3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-4Q9EQM3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-4Q9EQM3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-4Q9EQM3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-4Q9EQM3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-4Q9EQM3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-4Q9EQM3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.6■□□□□ 0.41
Nkx2-4Q9EQM3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.6■□□□□ 0.41
Nkx2-4Q9EQM3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.6■□□□□ 0.41
Nkx2-4Q9EQM3 Gm5364-201ENSMUST00000216789 889 ntBASIC17.6■□□□□ 0.41
Nkx2-4Q9EQM3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.6■□□□□ 0.41
Nkx2-4Q9EQM3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-4Q9EQM3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-4Q9EQM3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-4Q9EQM3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-4Q9EQM3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-4Q9EQM3 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-4Q9EQM3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-4Q9EQM3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-4Q9EQM3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-4Q9EQM3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-4Q9EQM3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-4Q9EQM3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-4Q9EQM3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Nkx2-4Q9EQM3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.59■□□□□ 0.41
Nkx2-4Q9EQM3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Nkx2-4Q9EQM3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.59■□□□□ 0.41
Nkx2-4Q9EQM3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-4Q9EQM3 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.59■□□□□ 0.41
Nkx2-4Q9EQM3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms