Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpne8Q9DC53 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.94■□□□□ 0.46
Cpne8Q9DC53 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpne8Q9DC53 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpne8Q9DC53 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cpne8Q9DC53 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cpne8Q9DC53 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpne8Q9DC53 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.94■□□□□ 0.46
Cpne8Q9DC53 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpne8Q9DC53 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cpne8Q9DC53 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpne8Q9DC53 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Cpne8Q9DC53 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpne8Q9DC53 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cpne8Q9DC53 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.94■□□□□ 0.46
Cpne8Q9DC53 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.94■□□□□ 0.46
Cpne8Q9DC53 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpne8Q9DC53 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpne8Q9DC53 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpne8Q9DC53 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpne8Q9DC53 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpne8Q9DC53 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.93■□□□□ 0.46
Cpne8Q9DC53 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cpne8Q9DC53 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cpne8Q9DC53 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpne8Q9DC53 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cpne8Q9DC53 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Cpne8Q9DC53 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cpne8Q9DC53 Gm24841-201ENSMUST00000158676 357 ntBASIC17.93■□□□□ 0.46
Cpne8Q9DC53 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.93■□□□□ 0.46
Cpne8Q9DC53 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.93■□□□□ 0.46
Cpne8Q9DC53 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpne8Q9DC53 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cpne8Q9DC53 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpne8Q9DC53 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpne8Q9DC53 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Cpne8Q9DC53 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cpne8Q9DC53 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpne8Q9DC53 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpne8Q9DC53 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpne8Q9DC53 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpne8Q9DC53 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.92■□□□□ 0.46
Cpne8Q9DC53 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.92■□□□□ 0.46
Cpne8Q9DC53 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpne8Q9DC53 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpne8Q9DC53 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cpne8Q9DC53 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cpne8Q9DC53 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpne8Q9DC53 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpne8Q9DC53 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpne8Q9DC53 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpne8Q9DC53 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cpne8Q9DC53 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpne8Q9DC53 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpne8Q9DC53 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cpne8Q9DC53 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cpne8Q9DC53 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpne8Q9DC53 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpne8Q9DC53 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cpne8Q9DC53 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpne8Q9DC53 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpne8Q9DC53 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.91■□□□□ 0.46
Cpne8Q9DC53 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Cpne8Q9DC53 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpne8Q9DC53 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpne8Q9DC53 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpne8Q9DC53 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpne8Q9DC53 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cpne8Q9DC53 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpne8Q9DC53 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpne8Q9DC53 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cpne8Q9DC53 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.9■□□□□ 0.46
Cpne8Q9DC53 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cpne8Q9DC53 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cpne8Q9DC53 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.9■□□□□ 0.46
Cpne8Q9DC53 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpne8Q9DC53 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpne8Q9DC53 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cpne8Q9DC53 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cpne8Q9DC53 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.9■□□□□ 0.46
Cpne8Q9DC53 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpne8Q9DC53 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpne8Q9DC53 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpne8Q9DC53 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
Cpne8Q9DC53 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cpne8Q9DC53 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cpne8Q9DC53 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpne8Q9DC53 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cpne8Q9DC53 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.89■□□□□ 0.45
Cpne8Q9DC53 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cpne8Q9DC53 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.89■□□□□ 0.45
Cpne8Q9DC53 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.89■□□□□ 0.45
Cpne8Q9DC53 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpne8Q9DC53 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpne8Q9DC53 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpne8Q9DC53 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.89■□□□□ 0.45
Cpne8Q9DC53 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.89■□□□□ 0.45
Cpne8Q9DC53 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpne8Q9DC53 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpne8Q9DC53 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms