Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.89■□□□□ 0.29
Rsph9Q9D9V4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rsph9Q9D9V4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rsph9Q9D9V4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rsph9Q9D9V4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rsph9Q9D9V4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rsph9Q9D9V4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rsph9Q9D9V4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rsph9Q9D9V4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.89■□□□□ 0.29
Rsph9Q9D9V4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Rsph9Q9D9V4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rsph9Q9D9V4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rsph9Q9D9V4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rsph9Q9D9V4 Gm10013-201ENSMUST00000106074 672 ntBASIC16.88■□□□□ 0.29
Rsph9Q9D9V4 Gm37025-201ENSMUST00000195159 829 ntBASIC16.88■□□□□ 0.29
Rsph9Q9D9V4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rsph9Q9D9V4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rsph9Q9D9V4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rsph9Q9D9V4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rsph9Q9D9V4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rsph9Q9D9V4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rsph9Q9D9V4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rsph9Q9D9V4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rsph9Q9D9V4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rsph9Q9D9V4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rsph9Q9D9V4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rsph9Q9D9V4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rsph9Q9D9V4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rsph9Q9D9V4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rsph9Q9D9V4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Rsph9Q9D9V4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rsph9Q9D9V4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rsph9Q9D9V4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rsph9Q9D9V4 Gm16061-201ENSMUST00000122167 857 ntBASIC16.87■□□□□ 0.29
Rsph9Q9D9V4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rsph9Q9D9V4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.87■□□□□ 0.29
Rsph9Q9D9V4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Rsph9Q9D9V4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rsph9Q9D9V4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rsph9Q9D9V4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rsph9Q9D9V4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rsph9Q9D9V4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 Idnk-204ENSMUST00000226010 1898 ntBASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 Gm9731-201ENSMUST00000209480 747 ntBASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rsph9Q9D9V4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rsph9Q9D9V4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rsph9Q9D9V4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.85■□□□□ 0.29
Rsph9Q9D9V4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rsph9Q9D9V4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rsph9Q9D9V4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Rsph9Q9D9V4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.85■□□□□ 0.29
Rsph9Q9D9V4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.85■□□□□ 0.29
Rsph9Q9D9V4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rsph9Q9D9V4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rsph9Q9D9V4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rsph9Q9D9V4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rsph9Q9D9V4 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.85■□□□□ 0.29
Rsph9Q9D9V4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rsph9Q9D9V4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rsph9Q9D9V4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.84■□□□□ 0.29
Rsph9Q9D9V4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rsph9Q9D9V4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rsph9Q9D9V4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Rsph9Q9D9V4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.84■□□□□ 0.29
Rsph9Q9D9V4 Gm13474-201ENSMUST00000122466 815 ntBASIC16.84■□□□□ 0.29
Rsph9Q9D9V4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.84■□□□□ 0.29
Rsph9Q9D9V4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.84■□□□□ 0.29
Rsph9Q9D9V4 Il3ra-202ENSMUST00000223589 738 ntBASIC16.84■□□□□ 0.29
Rsph9Q9D9V4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rsph9Q9D9V4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rsph9Q9D9V4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rsph9Q9D9V4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rsph9Q9D9V4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rsph9Q9D9V4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rsph9Q9D9V4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rsph9Q9D9V4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Rsph9Q9D9V4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms