Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snf8Q9CZ28 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.73■□□□□ 0.43
Snf8Q9CZ28 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Snf8Q9CZ28 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Snf8Q9CZ28 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.73■□□□□ 0.43
Snf8Q9CZ28 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snf8Q9CZ28 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snf8Q9CZ28 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snf8Q9CZ28 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snf8Q9CZ28 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snf8Q9CZ28 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snf8Q9CZ28 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Snf8Q9CZ28 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snf8Q9CZ28 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Snf8Q9CZ28 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snf8Q9CZ28 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.72■□□□□ 0.43
Snf8Q9CZ28 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Snf8Q9CZ28 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Snf8Q9CZ28 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snf8Q9CZ28 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Snf8Q9CZ28 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.72■□□□□ 0.43
Snf8Q9CZ28 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snf8Q9CZ28 Gm11643-201ENSMUST00000119578 864 ntBASIC17.72■□□□□ 0.43
Snf8Q9CZ28 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snf8Q9CZ28 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Snf8Q9CZ28 Rab3c-203ENSMUST00000224180 967 ntBASIC17.72■□□□□ 0.43
Snf8Q9CZ28 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snf8Q9CZ28 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Snf8Q9CZ28 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snf8Q9CZ28 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Snf8Q9CZ28 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Snf8Q9CZ28 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snf8Q9CZ28 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snf8Q9CZ28 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.72■□□□□ 0.43
Snf8Q9CZ28 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Snf8Q9CZ28 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snf8Q9CZ28 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snf8Q9CZ28 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snf8Q9CZ28 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snf8Q9CZ28 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snf8Q9CZ28 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Snf8Q9CZ28 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.71■□□□□ 0.43
Snf8Q9CZ28 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snf8Q9CZ28 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Snf8Q9CZ28 Mtag2-201ENSMUST00000058665 714 ntBASIC17.71■□□□□ 0.43
Snf8Q9CZ28 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snf8Q9CZ28 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.71■□□□□ 0.43
Snf8Q9CZ28 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snf8Q9CZ28 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snf8Q9CZ28 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snf8Q9CZ28 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snf8Q9CZ28 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.71■□□□□ 0.43
Snf8Q9CZ28 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snf8Q9CZ28 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snf8Q9CZ28 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snf8Q9CZ28 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Snf8Q9CZ28 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Snf8Q9CZ28 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snf8Q9CZ28 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snf8Q9CZ28 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snf8Q9CZ28 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snf8Q9CZ28 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snf8Q9CZ28 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.7■□□□□ 0.42
Snf8Q9CZ28 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snf8Q9CZ28 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Snf8Q9CZ28 Gm13148-201ENSMUST00000118892 745 ntBASIC17.7■□□□□ 0.42
Snf8Q9CZ28 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.7■□□□□ 0.42
Snf8Q9CZ28 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snf8Q9CZ28 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snf8Q9CZ28 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snf8Q9CZ28 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Snf8Q9CZ28 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snf8Q9CZ28 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snf8Q9CZ28 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snf8Q9CZ28 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.69■□□□□ 0.42
Snf8Q9CZ28 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Snf8Q9CZ28 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snf8Q9CZ28 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snf8Q9CZ28 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.69■□□□□ 0.42
Snf8Q9CZ28 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snf8Q9CZ28 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Snf8Q9CZ28 Mir6349-201ENSMUST00000184059 97 ntBASIC17.69■□□□□ 0.42
Snf8Q9CZ28 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.69■□□□□ 0.42
Snf8Q9CZ28 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snf8Q9CZ28 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snf8Q9CZ28 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snf8Q9CZ28 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snf8Q9CZ28 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.69■□□□□ 0.42
Snf8Q9CZ28 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snf8Q9CZ28 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.69■□□□□ 0.42
Snf8Q9CZ28 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Snf8Q9CZ28 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.69■□□□□ 0.42
Snf8Q9CZ28 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.69■□□□□ 0.42
Snf8Q9CZ28 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.68■□□□□ 0.42
Snf8Q9CZ28 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Snf8Q9CZ28 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snf8Q9CZ28 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Snf8Q9CZ28 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Snf8Q9CZ28 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Snf8Q9CZ28 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms