Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssr1Q9CY50 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ssr1Q9CY50 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssr1Q9CY50 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssr1Q9CY50 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssr1Q9CY50 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssr1Q9CY50 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.67■□□□□ 0.58
Ssr1Q9CY50 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssr1Q9CY50 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssr1Q9CY50 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ssr1Q9CY50 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssr1Q9CY50 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssr1Q9CY50 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssr1Q9CY50 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssr1Q9CY50 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssr1Q9CY50 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssr1Q9CY50 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssr1Q9CY50 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Ssr1Q9CY50 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssr1Q9CY50 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.66■□□□□ 0.58
Ssr1Q9CY50 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssr1Q9CY50 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ssr1Q9CY50 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssr1Q9CY50 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssr1Q9CY50 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssr1Q9CY50 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ssr1Q9CY50 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.66■□□□□ 0.58
Ssr1Q9CY50 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssr1Q9CY50 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ssr1Q9CY50 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ssr1Q9CY50 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssr1Q9CY50 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssr1Q9CY50 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssr1Q9CY50 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssr1Q9CY50 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssr1Q9CY50 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ssr1Q9CY50 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Ssr1Q9CY50 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.65■□□□□ 0.58
Ssr1Q9CY50 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.65■□□□□ 0.58
Ssr1Q9CY50 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Ssr1Q9CY50 Gm29791-202ENSMUST00000207888 369 ntBASIC18.65■□□□□ 0.58
Ssr1Q9CY50 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssr1Q9CY50 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssr1Q9CY50 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ssr1Q9CY50 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ssr1Q9CY50 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.65■□□□□ 0.58
Ssr1Q9CY50 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssr1Q9CY50 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssr1Q9CY50 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssr1Q9CY50 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssr1Q9CY50 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.65■□□□□ 0.58
Ssr1Q9CY50 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssr1Q9CY50 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ssr1Q9CY50 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.64■□□□□ 0.57
Ssr1Q9CY50 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssr1Q9CY50 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ssr1Q9CY50 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.64■□□□□ 0.57
Ssr1Q9CY50 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.64■□□□□ 0.57
Ssr1Q9CY50 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.64■□□□□ 0.57
Ssr1Q9CY50 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.64■□□□□ 0.57
Ssr1Q9CY50 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssr1Q9CY50 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ssr1Q9CY50 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ssr1Q9CY50 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.64■□□□□ 0.57
Ssr1Q9CY50 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssr1Q9CY50 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssr1Q9CY50 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssr1Q9CY50 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssr1Q9CY50 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssr1Q9CY50 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.64■□□□□ 0.57
Ssr1Q9CY50 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssr1Q9CY50 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssr1Q9CY50 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.63■□□□□ 0.57
Ssr1Q9CY50 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssr1Q9CY50 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ssr1Q9CY50 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssr1Q9CY50 Gm11927-201ENSMUST00000118472 759 ntBASIC18.63■□□□□ 0.57
Ssr1Q9CY50 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.63■□□□□ 0.57
Ssr1Q9CY50 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.63■□□□□ 0.57
Ssr1Q9CY50 Mtag2-201ENSMUST00000058665 714 ntBASIC18.63■□□□□ 0.57
Ssr1Q9CY50 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.63■□□□□ 0.57
Ssr1Q9CY50 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.63■□□□□ 0.57
Ssr1Q9CY50 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssr1Q9CY50 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssr1Q9CY50 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.63■□□□□ 0.57
Ssr1Q9CY50 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssr1Q9CY50 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.63■□□□□ 0.57
Ssr1Q9CY50 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssr1Q9CY50 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ssr1Q9CY50 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ssr1Q9CY50 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssr1Q9CY50 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssr1Q9CY50 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssr1Q9CY50 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssr1Q9CY50 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
Ssr1Q9CY50 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssr1Q9CY50 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssr1Q9CY50 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ssr1Q9CY50 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ssr1Q9CY50 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms