Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4rQ99PI8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4rQ99PI8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Rtn4rQ99PI8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Rtn4rQ99PI8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rtn4rQ99PI8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4rQ99PI8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4rQ99PI8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4rQ99PI8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4rQ99PI8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.18■□□□□ 0.02
Rtn4rQ99PI8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4rQ99PI8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4rQ99PI8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.18■□□□□ 0.02
Rtn4rQ99PI8 Gm30025-201ENSMUST00000218555 728 ntBASIC15.18■□□□□ 0.02
Rtn4rQ99PI8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.18■□□□□ 0.02
Rtn4rQ99PI8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4rQ99PI8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4rQ99PI8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.18■□□□□ 0.02
Rtn4rQ99PI8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rtn4rQ99PI8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4rQ99PI8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rtn4rQ99PI8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4rQ99PI8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4rQ99PI8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4rQ99PI8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4rQ99PI8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4rQ99PI8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4rQ99PI8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4rQ99PI8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Rtn4rQ99PI8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4rQ99PI8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rtn4rQ99PI8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4rQ99PI8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rtn4rQ99PI8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rtn4rQ99PI8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.17■□□□□ 0.02
Rtn4rQ99PI8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rtn4rQ99PI8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.17■□□□□ 0.02
Rtn4rQ99PI8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rtn4rQ99PI8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rtn4rQ99PI8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4rQ99PI8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4rQ99PI8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4rQ99PI8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4rQ99PI8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
Rtn4rQ99PI8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn4rQ99PI8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn4rQ99PI8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn4rQ99PI8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn4rQ99PI8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn4rQ99PI8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn4rQ99PI8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn4rQ99PI8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.16■□□□□ 0.02
Rtn4rQ99PI8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.16■□□□□ 0.02
Rtn4rQ99PI8 Gm11539-201ENSMUST00000119837 557 ntBASIC15.16■□□□□ 0.02
Rtn4rQ99PI8 Gm13436-201ENSMUST00000120418 567 ntBASIC15.16■□□□□ 0.02
Rtn4rQ99PI8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.16■□□□□ 0.02
Rtn4rQ99PI8 Gm43799-201ENSMUST00000201845 579 ntBASIC15.16■□□□□ 0.02
Rtn4rQ99PI8 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.16■□□□□ 0.02
Rtn4rQ99PI8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn4rQ99PI8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn4rQ99PI8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn4rQ99PI8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn4rQ99PI8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn4rQ99PI8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn4rQ99PI8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn4rQ99PI8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rtn4rQ99PI8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn4rQ99PI8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn4rQ99PI8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn4rQ99PI8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn4rQ99PI8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn4rQ99PI8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.15■□□□□ 0.02
Rtn4rQ99PI8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn4rQ99PI8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn4rQ99PI8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn4rQ99PI8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn4rQ99PI8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn4rQ99PI8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rtn4rQ99PI8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rtn4rQ99PI8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn4rQ99PI8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn4rQ99PI8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.15■□□□□ 0.02
Rtn4rQ99PI8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn4rQ99PI8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rtn4rQ99PI8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn4rQ99PI8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.14■□□□□ 0.01
Rtn4rQ99PI8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn4rQ99PI8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn4rQ99PI8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn4rQ99PI8 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.14■□□□□ 0.01
Rtn4rQ99PI8 Gm13559-201ENSMUST00000120476 863 ntBASIC15.14■□□□□ 0.01
Rtn4rQ99PI8 Gm7638-201ENSMUST00000121348 967 ntBASIC15.14■□□□□ 0.01
Rtn4rQ99PI8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.14■□□□□ 0.01
Rtn4rQ99PI8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn4rQ99PI8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Rtn4rQ99PI8 Mir7071-201ENSMUST00000184847 69 ntBASIC15.14■□□□□ 0.01
Rtn4rQ99PI8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.14■□□□□ 0.01
Rtn4rQ99PI8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn4rQ99PI8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn4rQ99PI8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms