Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tlr3Q99MB1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tlr3Q99MB1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tlr3Q99MB1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tlr3Q99MB1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.48■□□□□ 0.55
Tlr3Q99MB1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tlr3Q99MB1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Tlr3Q99MB1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tlr3Q99MB1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tlr3Q99MB1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tlr3Q99MB1 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.48■□□□□ 0.55
Tlr3Q99MB1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tlr3Q99MB1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tlr3Q99MB1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tlr3Q99MB1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Tlr3Q99MB1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Tlr3Q99MB1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.47■□□□□ 0.55
Tlr3Q99MB1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tlr3Q99MB1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tlr3Q99MB1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tlr3Q99MB1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tlr3Q99MB1 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Tlr3Q99MB1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.47■□□□□ 0.55
Tlr3Q99MB1 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.47■□□□□ 0.55
Tlr3Q99MB1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tlr3Q99MB1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tlr3Q99MB1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tlr3Q99MB1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tlr3Q99MB1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tlr3Q99MB1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Tlr3Q99MB1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tlr3Q99MB1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tlr3Q99MB1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tlr3Q99MB1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tlr3Q99MB1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tlr3Q99MB1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.46■□□□□ 0.55
Tlr3Q99MB1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.46■□□□□ 0.55
Tlr3Q99MB1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tlr3Q99MB1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tlr3Q99MB1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Tlr3Q99MB1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tlr3Q99MB1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tlr3Q99MB1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Tlr3Q99MB1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Tlr3Q99MB1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Tlr3Q99MB1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Tlr3Q99MB1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tlr3Q99MB1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tlr3Q99MB1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tlr3Q99MB1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tlr3Q99MB1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tlr3Q99MB1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tlr3Q99MB1 Mir5122-201ENSMUST00000175004 89 ntBASIC18.45■□□□□ 0.54
Tlr3Q99MB1 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.45■□□□□ 0.54
Tlr3Q99MB1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tlr3Q99MB1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tlr3Q99MB1 Gm5417-201ENSMUST00000079706 384 ntBASIC18.45■□□□□ 0.54
Tlr3Q99MB1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tlr3Q99MB1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tlr3Q99MB1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tlr3Q99MB1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tlr3Q99MB1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tlr3Q99MB1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tlr3Q99MB1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tlr3Q99MB1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tlr3Q99MB1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tlr3Q99MB1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tlr3Q99MB1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tlr3Q99MB1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Tlr3Q99MB1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Tlr3Q99MB1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Tlr3Q99MB1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.44■□□□□ 0.54
Tlr3Q99MB1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.44■□□□□ 0.54
Tlr3Q99MB1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tlr3Q99MB1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Tlr3Q99MB1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tlr3Q99MB1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tlr3Q99MB1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tlr3Q99MB1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tlr3Q99MB1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tlr3Q99MB1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Tlr3Q99MB1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tlr3Q99MB1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Tlr3Q99MB1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tlr3Q99MB1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tlr3Q99MB1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tlr3Q99MB1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Tlr3Q99MB1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.43■□□□□ 0.54
Tlr3Q99MB1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tlr3Q99MB1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tlr3Q99MB1 Gm12085-201ENSMUST00000119263 940 ntBASIC18.43■□□□□ 0.54
Tlr3Q99MB1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tlr3Q99MB1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tlr3Q99MB1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.43■□□□□ 0.54
Tlr3Q99MB1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tlr3Q99MB1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tlr3Q99MB1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tlr3Q99MB1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tlr3Q99MB1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tlr3Q99MB1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms