Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Scrt1Q99M85 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scrt1Q99M85 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.07■□□□□ 0
Scrt1Q99M85 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scrt1Q99M85 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scrt1Q99M85 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Scrt1Q99M85 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Scrt1Q99M85 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scrt1Q99M85 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.07■□□□□ 0
Scrt1Q99M85 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.07■□□□□ 0
Scrt1Q99M85 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Scrt1Q99M85 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Scrt1Q99M85 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scrt1Q99M85 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Scrt1Q99M85 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.07■□□□□ 0
Scrt1Q99M85 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Scrt1Q99M85 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.07■□□□□ 0
Scrt1Q99M85 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Scrt1Q99M85 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Scrt1Q99M85 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scrt1Q99M85 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.07■□□□□ 0
Scrt1Q99M85 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Scrt1Q99M85 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scrt1Q99M85 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scrt1Q99M85 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scrt1Q99M85 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scrt1Q99M85 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scrt1Q99M85 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.06■□□□□ 0
Scrt1Q99M85 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Scrt1Q99M85 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scrt1Q99M85 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scrt1Q99M85 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scrt1Q99M85 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Scrt1Q99M85 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.06■□□□□ 0
Scrt1Q99M85 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scrt1Q99M85 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Scrt1Q99M85 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Scrt1Q99M85 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scrt1Q99M85 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scrt1Q99M85 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scrt1Q99M85 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.06■□□□□ 0
Scrt1Q99M85 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Scrt1Q99M85 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scrt1Q99M85 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Scrt1Q99M85 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Scrt1Q99M85 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Scrt1Q99M85 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Scrt1Q99M85 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Scrt1Q99M85 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Scrt1Q99M85 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scrt1Q99M85 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scrt1Q99M85 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.05■□□□□ -0
Scrt1Q99M85 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.05■□□□□ -0
Scrt1Q99M85 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Scrt1Q99M85 Gm29518-201ENSMUST00000190858 372 ntBASIC15.05■□□□□ -0
Scrt1Q99M85 Gm21559-201ENSMUST00000220638 855 ntBASIC15.05■□□□□ -0
Scrt1Q99M85 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scrt1Q99M85 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scrt1Q99M85 Gm8587-201ENSMUST00000076538 843 ntBASIC15.05■□□□□ -0
Scrt1Q99M85 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.05■□□□□ -0
Scrt1Q99M85 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.05■□□□□ -0
Scrt1Q99M85 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scrt1Q99M85 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scrt1Q99M85 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.05■□□□□ -0
Scrt1Q99M85 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scrt1Q99M85 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.05■□□□□ -0
Scrt1Q99M85 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scrt1Q99M85 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scrt1Q99M85 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.05■□□□□ -0
Scrt1Q99M85 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Scrt1Q99M85 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.04■□□□□ -0
Scrt1Q99M85 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scrt1Q99M85 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.04■□□□□ -0
Scrt1Q99M85 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Scrt1Q99M85 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scrt1Q99M85 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Scrt1Q99M85 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Scrt1Q99M85 Gm5587-201ENSMUST00000206270 674 ntBASIC15.04■□□□□ -0
Scrt1Q99M85 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.04■□□□□ -0
Scrt1Q99M85 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Scrt1Q99M85 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Scrt1Q99M85 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.04■□□□□ -0
Scrt1Q99M85 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scrt1Q99M85 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scrt1Q99M85 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.03■□□□□ -0
Scrt1Q99M85 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.03■□□□□ -0
Scrt1Q99M85 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.03■□□□□ -0
Scrt1Q99M85 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scrt1Q99M85 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Scrt1Q99M85 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Scrt1Q99M85 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Scrt1Q99M85 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Scrt1Q99M85 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scrt1Q99M85 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Scrt1Q99M85 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scrt1Q99M85 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scrt1Q99M85 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.03■□□□□ -0
Scrt1Q99M85 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
Scrt1Q99M85 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.03■□□□□ -0
Scrt1Q99M85 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms