Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk9Q99J95 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk9Q99J95 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk9Q99J95 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk9Q99J95 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Cdk9Q99J95 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cdk9Q99J95 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdk9Q99J95 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdk9Q99J95 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.35■□□□□ 0.37
Cdk9Q99J95 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdk9Q99J95 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdk9Q99J95 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdk9Q99J95 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdk9Q99J95 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.35■□□□□ 0.37
Cdk9Q99J95 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdk9Q99J95 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.35■□□□□ 0.37
Cdk9Q99J95 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdk9Q99J95 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cdk9Q99J95 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk9Q99J95 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk9Q99J95 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk9Q99J95 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk9Q99J95 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cdk9Q99J95 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk9Q99J95 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk9Q99J95 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.34■□□□□ 0.37
Cdk9Q99J95 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.34■□□□□ 0.37
Cdk9Q99J95 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk9Q99J95 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk9Q99J95 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.34■□□□□ 0.37
Cdk9Q99J95 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk9Q99J95 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.34■□□□□ 0.37
Cdk9Q99J95 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.34■□□□□ 0.37
Cdk9Q99J95 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cdk9Q99J95 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk9Q99J95 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk9Q99J95 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk9Q99J95 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk9Q99J95 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdk9Q99J95 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cdk9Q99J95 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.33■□□□□ 0.37
Cdk9Q99J95 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdk9Q99J95 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdk9Q99J95 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdk9Q99J95 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdk9Q99J95 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Cdk9Q99J95 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.33■□□□□ 0.36
Cdk9Q99J95 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cdk9Q99J95 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdk9Q99J95 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdk9Q99J95 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdk9Q99J95 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdk9Q99J95 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cdk9Q99J95 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdk9Q99J95 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk9Q99J95 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk9Q99J95 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk9Q99J95 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk9Q99J95 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk9Q99J95 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk9Q99J95 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk9Q99J95 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk9Q99J95 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
Cdk9Q99J95 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk9Q99J95 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk9Q99J95 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cdk9Q99J95 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.32■□□□□ 0.36
Cdk9Q99J95 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.32■□□□□ 0.36
Cdk9Q99J95 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.32■□□□□ 0.36
Cdk9Q99J95 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk9Q99J95 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk9Q99J95 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk9Q99J95 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdk9Q99J95 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdk9Q99J95 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdk9Q99J95 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdk9Q99J95 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdk9Q99J95 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdk9Q99J95 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cdk9Q99J95 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdk9Q99J95 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.31■□□□□ 0.36
Cdk9Q99J95 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.31■□□□□ 0.36
Cdk9Q99J95 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.31■□□□□ 0.36
Cdk9Q99J95 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdk9Q99J95 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdk9Q99J95 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cdk9Q99J95 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdk9Q99J95 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdk9Q99J95 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdk9Q99J95 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.31■□□□□ 0.36
Cdk9Q99J95 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk9Q99J95 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk9Q99J95 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk9Q99J95 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cdk9Q99J95 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk9Q99J95 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk9Q99J95 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk9Q99J95 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk9Q99J95 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk9Q99J95 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms