Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Top1mtQ8R4U6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Top1mtQ8R4U6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Top1mtQ8R4U6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Top1mtQ8R4U6 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Top1mtQ8R4U6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Top1mtQ8R4U6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.58■□□□□ 0.88
Top1mtQ8R4U6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Top1mtQ8R4U6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.57■□□□□ 0.88
Top1mtQ8R4U6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Top1mtQ8R4U6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Top1mtQ8R4U6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.57■□□□□ 0.88
Top1mtQ8R4U6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Top1mtQ8R4U6 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Top1mtQ8R4U6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Top1mtQ8R4U6 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Top1mtQ8R4U6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Top1mtQ8R4U6 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Top1mtQ8R4U6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Top1mtQ8R4U6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Top1mtQ8R4U6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Top1mtQ8R4U6 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.56■□□□□ 0.88
Top1mtQ8R4U6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Top1mtQ8R4U6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Top1mtQ8R4U6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Top1mtQ8R4U6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.56■□□□□ 0.88
Top1mtQ8R4U6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.56■□□□□ 0.88
Top1mtQ8R4U6 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.56■□□□□ 0.88
Top1mtQ8R4U6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Top1mtQ8R4U6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Top1mtQ8R4U6 Gm10812-201ENSMUST00000099864 546 ntBASIC20.56■□□□□ 0.88
Top1mtQ8R4U6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Top1mtQ8R4U6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Top1mtQ8R4U6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Top1mtQ8R4U6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.56■□□□□ 0.88
Top1mtQ8R4U6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Top1mtQ8R4U6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.56■□□□□ 0.88
Top1mtQ8R4U6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.55■□□□□ 0.88
Top1mtQ8R4U6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Top1mtQ8R4U6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Top1mtQ8R4U6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Top1mtQ8R4U6 Gm715-201ENSMUST00000117865 831 ntBASIC20.55■□□□□ 0.88
Top1mtQ8R4U6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.55■□□□□ 0.88
Top1mtQ8R4U6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Top1mtQ8R4U6 Gm37025-201ENSMUST00000195159 829 ntBASIC20.55■□□□□ 0.88
Top1mtQ8R4U6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.55■□□□□ 0.88
Top1mtQ8R4U6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Top1mtQ8R4U6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Top1mtQ8R4U6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Top1mtQ8R4U6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Top1mtQ8R4U6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Top1mtQ8R4U6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Top1mtQ8R4U6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.55■□□□□ 0.88
Top1mtQ8R4U6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Top1mtQ8R4U6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Top1mtQ8R4U6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Top1mtQ8R4U6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Top1mtQ8R4U6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Top1mtQ8R4U6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.54■□□□□ 0.88
Top1mtQ8R4U6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Top1mtQ8R4U6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.54■□□□□ 0.88
Top1mtQ8R4U6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Top1mtQ8R4U6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Top1mtQ8R4U6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Top1mtQ8R4U6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Top1mtQ8R4U6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Top1mtQ8R4U6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Top1mtQ8R4U6 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Top1mtQ8R4U6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Top1mtQ8R4U6 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Top1mtQ8R4U6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Top1mtQ8R4U6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Top1mtQ8R4U6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Top1mtQ8R4U6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Top1mtQ8R4U6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Top1mtQ8R4U6 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Top1mtQ8R4U6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Top1mtQ8R4U6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Top1mtQ8R4U6 Gm17661-201ENSMUST00000170317 270 ntBASIC20.53■□□□□ 0.88
Top1mtQ8R4U6 Gm38027-201ENSMUST00000192315 235 ntBASIC20.53■□□□□ 0.88
Top1mtQ8R4U6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Top1mtQ8R4U6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Top1mtQ8R4U6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Top1mtQ8R4U6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Top1mtQ8R4U6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Top1mtQ8R4U6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Top1mtQ8R4U6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Top1mtQ8R4U6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Top1mtQ8R4U6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Top1mtQ8R4U6 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Top1mtQ8R4U6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Top1mtQ8R4U6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Top1mtQ8R4U6 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Top1mtQ8R4U6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Top1mtQ8R4U6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Top1mtQ8R4U6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Top1mtQ8R4U6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Top1mtQ8R4U6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Top1mtQ8R4U6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Top1mtQ8R4U6 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms