Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna3Q8R4G9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.92■□□□□ 0.3
Chrna3Q8R4G9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna3Q8R4G9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna3Q8R4G9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna3Q8R4G9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.92■□□□□ 0.3
Chrna3Q8R4G9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna3Q8R4G9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.92■□□□□ 0.3
Chrna3Q8R4G9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Chrna3Q8R4G9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Chrna3Q8R4G9 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.92■□□□□ 0.3
Chrna3Q8R4G9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna3Q8R4G9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna3Q8R4G9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.92■□□□□ 0.3
Chrna3Q8R4G9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.92■□□□□ 0.3
Chrna3Q8R4G9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna3Q8R4G9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna3Q8R4G9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna3Q8R4G9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna3Q8R4G9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna3Q8R4G9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna3Q8R4G9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna3Q8R4G9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna3Q8R4G9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna3Q8R4G9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.91■□□□□ 0.3
Chrna3Q8R4G9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna3Q8R4G9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.91■□□□□ 0.3
Chrna3Q8R4G9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna3Q8R4G9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chrna3Q8R4G9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chrna3Q8R4G9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chrna3Q8R4G9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chrna3Q8R4G9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chrna3Q8R4G9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chrna3Q8R4G9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.9■□□□□ 0.3
Chrna3Q8R4G9 Gm9731-201ENSMUST00000209480 747 ntBASIC16.9■□□□□ 0.3
Chrna3Q8R4G9 Gm7791-201ENSMUST00000219066 539 ntBASIC16.9■□□□□ 0.3
Chrna3Q8R4G9 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.9■□□□□ 0.3
Chrna3Q8R4G9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chrna3Q8R4G9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chrna3Q8R4G9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chrna3Q8R4G9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Chrna3Q8R4G9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Chrna3Q8R4G9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chrna3Q8R4G9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chrna3Q8R4G9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chrna3Q8R4G9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chrna3Q8R4G9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chrna3Q8R4G9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chrna3Q8R4G9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chrna3Q8R4G9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chrna3Q8R4G9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chrna3Q8R4G9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chrna3Q8R4G9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
Chrna3Q8R4G9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Chrna3Q8R4G9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chrna3Q8R4G9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chrna3Q8R4G9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chrna3Q8R4G9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Chrna3Q8R4G9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Chrna3Q8R4G9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.89■□□□□ 0.29
Chrna3Q8R4G9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.89■□□□□ 0.29
Chrna3Q8R4G9 Gm2274-201ENSMUST00000184539 609 ntBASIC16.89■□□□□ 0.29
Chrna3Q8R4G9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.89■□□□□ 0.29
Chrna3Q8R4G9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chrna3Q8R4G9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chrna3Q8R4G9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chrna3Q8R4G9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.89■□□□□ 0.29
Chrna3Q8R4G9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chrna3Q8R4G9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chrna3Q8R4G9 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.88■□□□□ 0.29
Chrna3Q8R4G9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chrna3Q8R4G9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chrna3Q8R4G9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.88■□□□□ 0.29
Chrna3Q8R4G9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chrna3Q8R4G9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chrna3Q8R4G9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Gm10231-201ENSMUST00000181584 441 ntBASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Gm10175-202ENSMUST00000208752 441 ntBASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Gm18959-201ENSMUST00000208954 655 ntBASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms