Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cystm1Q8K353 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cystm1Q8K353 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cystm1Q8K353 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cystm1Q8K353 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cystm1Q8K353 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cystm1Q8K353 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cystm1Q8K353 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cystm1Q8K353 AC154266.1-201ENSMUST00000223190 503 ntBASIC10.82□□□□□ -0.68
Cystm1Q8K353 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cystm1Q8K353 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cystm1Q8K353 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cystm1Q8K353 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cystm1Q8K353 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cystm1Q8K353 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cystm1Q8K353 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cystm1Q8K353 Reep4-203ENSMUST00000226563 1444 ntBASIC10.82□□□□□ -0.68
Cystm1Q8K353 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Cystm1Q8K353 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cystm1Q8K353 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC10.82□□□□□ -0.68
Cystm1Q8K353 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cystm1Q8K353 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cystm1Q8K353 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cystm1Q8K353 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Cystm1Q8K353 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cystm1Q8K353 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cystm1Q8K353 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC10.81□□□□□ -0.68
Cystm1Q8K353 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cystm1Q8K353 Gm13146-201ENSMUST00000118508 780 ntBASIC10.81□□□□□ -0.68
Cystm1Q8K353 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Cystm1Q8K353 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cystm1Q8K353 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC10.81□□□□□ -0.68
Cystm1Q8K353 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cystm1Q8K353 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC10.81□□□□□ -0.68
Cystm1Q8K353 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cystm1Q8K353 Gm10602-201ENSMUST00000098239 609 ntBASIC10.81□□□□□ -0.68
Cystm1Q8K353 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cystm1Q8K353 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cystm1Q8K353 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cystm1Q8K353 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC10.81□□□□□ -0.68
Cystm1Q8K353 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cystm1Q8K353 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cystm1Q8K353 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cystm1Q8K353 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cystm1Q8K353 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Cystm1Q8K353 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cystm1Q8K353 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cystm1Q8K353 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cystm1Q8K353 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cystm1Q8K353 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cystm1Q8K353 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cystm1Q8K353 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cystm1Q8K353 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cystm1Q8K353 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC10.8□□□□□ -0.68
Cystm1Q8K353 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cystm1Q8K353 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cystm1Q8K353 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cystm1Q8K353 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cystm1Q8K353 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cystm1Q8K353 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cystm1Q8K353 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cystm1Q8K353 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cystm1Q8K353 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cystm1Q8K353 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cystm1Q8K353 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cystm1Q8K353 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cystm1Q8K353 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cystm1Q8K353 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC10.79□□□□□ -0.68
Cystm1Q8K353 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Gm29257-201ENSMUST00000186115 639 ntBASIC10.79□□□□□ -0.68
Cystm1Q8K353 Gm7514-201ENSMUST00000209475 934 ntBASIC10.79□□□□□ -0.68
Cystm1Q8K353 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Cystm1Q8K353 AC154412.1-201ENSMUST00000226540 2786 ntBASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms