Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ppp4r4Q8C0Y0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ppp4r4Q8C0Y0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.4■□□□□ 0.38
Ppp4r4Q8C0Y0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ppp4r4Q8C0Y0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ppp4r4Q8C0Y0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ppp4r4Q8C0Y0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ppp4r4Q8C0Y0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ppp4r4Q8C0Y0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ppp4r4Q8C0Y0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ppp4r4Q8C0Y0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ppp4r4Q8C0Y0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ppp4r4Q8C0Y0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ppp4r4Q8C0Y0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ppp4r4Q8C0Y0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ppp4r4Q8C0Y0 Gm13401-201ENSMUST00000117074 291 ntBASIC17.39■□□□□ 0.37
Ppp4r4Q8C0Y0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ppp4r4Q8C0Y0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.39■□□□□ 0.37
Ppp4r4Q8C0Y0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ppp4r4Q8C0Y0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.39■□□□□ 0.37
Ppp4r4Q8C0Y0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.39■□□□□ 0.37
Ppp4r4Q8C0Y0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ppp4r4Q8C0Y0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ppp4r4Q8C0Y0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ppp4r4Q8C0Y0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ppp4r4Q8C0Y0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ppp4r4Q8C0Y0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ppp4r4Q8C0Y0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ppp4r4Q8C0Y0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ppp4r4Q8C0Y0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Gm10418-201ENSMUST00000100943 576 ntBASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ppp4r4Q8C0Y0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.37■□□□□ 0.37
Ppp4r4Q8C0Y0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ppp4r4Q8C0Y0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ppp4r4Q8C0Y0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ppp4r4Q8C0Y0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ppp4r4Q8C0Y0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ppp4r4Q8C0Y0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ppp4r4Q8C0Y0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.37■□□□□ 0.37
Ppp4r4Q8C0Y0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ppp4r4Q8C0Y0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ppp4r4Q8C0Y0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ppp4r4Q8C0Y0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ppp4r4Q8C0Y0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ppp4r4Q8C0Y0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ppp4r4Q8C0Y0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ppp4r4Q8C0Y0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ppp4r4Q8C0Y0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ppp4r4Q8C0Y0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ppp4r4Q8C0Y0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ppp4r4Q8C0Y0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ppp4r4Q8C0Y0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ppp4r4Q8C0Y0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ppp4r4Q8C0Y0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ppp4r4Q8C0Y0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ppp4r4Q8C0Y0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ppp4r4Q8C0Y0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ppp4r4Q8C0Y0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ppp4r4Q8C0Y0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ppp4r4Q8C0Y0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ppp4r4Q8C0Y0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ppp4r4Q8C0Y0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ppp4r4Q8C0Y0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ppp4r4Q8C0Y0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ppp4r4Q8C0Y0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ppp4r4Q8C0Y0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ppp4r4Q8C0Y0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ppp4r4Q8C0Y0 Gm10517-202ENSMUST00000192970 758 ntBASIC17.35■□□□□ 0.37
Ppp4r4Q8C0Y0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ppp4r4Q8C0Y0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ppp4r4Q8C0Y0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ppp4r4Q8C0Y0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ppp4r4Q8C0Y0 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Ppp4r4Q8C0Y0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ppp4r4Q8C0Y0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ppp4r4Q8C0Y0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms