Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Nhlrc1Q8BR37 Gm29791-202ENSMUST00000207888 369 ntBASIC13.36□□□□□ -0.27
Nhlrc1Q8BR37 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nhlrc1Q8BR37 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Nhlrc1Q8BR37 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nhlrc1Q8BR37 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nhlrc1Q8BR37 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Nhlrc1Q8BR37 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nhlrc1Q8BR37 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nhlrc1Q8BR37 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nhlrc1Q8BR37 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nhlrc1Q8BR37 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nhlrc1Q8BR37 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nhlrc1Q8BR37 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nhlrc1Q8BR37 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nhlrc1Q8BR37 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nhlrc1Q8BR37 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nhlrc1Q8BR37 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.36□□□□□ -0.27
Nhlrc1Q8BR37 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Gm18101-201ENSMUST00000215769 548 ntBASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nhlrc1Q8BR37 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Gm24841-201ENSMUST00000158676 357 ntBASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Gm23634-201ENSMUST00000175071 91 ntBASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Gm21362-201ENSMUST00000194272 928 ntBASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.34□□□□□ -0.27
Nhlrc1Q8BR37 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nhlrc1Q8BR37 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nhlrc1Q8BR37 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.33□□□□□ -0.27
Nhlrc1Q8BR37 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 AA414768-201ENSMUST00000121924 1257 ntBASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 Gm25016-201ENSMUST00000158399 131 ntBASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc1Q8BR37 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms