Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Upk3bQ80YF6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3bQ80YF6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3bQ80YF6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.57□□□□□ -0.08
Upk3bQ80YF6 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.57□□□□□ -0.08
Upk3bQ80YF6 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.57□□□□□ -0.08
Upk3bQ80YF6 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3bQ80YF6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3bQ80YF6 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.57□□□□□ -0.08
Upk3bQ80YF6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3bQ80YF6 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3bQ80YF6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3bQ80YF6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3bQ80YF6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Upk3bQ80YF6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.57□□□□□ -0.08
Upk3bQ80YF6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
Upk3bQ80YF6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3bQ80YF6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3bQ80YF6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3bQ80YF6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3bQ80YF6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3bQ80YF6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Upk3bQ80YF6 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3bQ80YF6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3bQ80YF6 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3bQ80YF6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3bQ80YF6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3bQ80YF6 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3bQ80YF6 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Gm13401-201ENSMUST00000117074 291 ntBASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3bQ80YF6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk3bQ80YF6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Upk3bQ80YF6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk3bQ80YF6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Upk3bQ80YF6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Upk3bQ80YF6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk3bQ80YF6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk3bQ80YF6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk3bQ80YF6 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk3bQ80YF6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Upk3bQ80YF6 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.55□□□□□ -0.08
Upk3bQ80YF6 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Upk3bQ80YF6 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk3bQ80YF6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.55□□□□□ -0.08
Upk3bQ80YF6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk3bQ80YF6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk3bQ80YF6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk3bQ80YF6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms