Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.83■□□□□ 0.44
Trim62Q80V85 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trim62Q80V85 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.82■□□□□ 0.44
Trim62Q80V85 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim62Q80V85 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.82■□□□□ 0.44
Trim62Q80V85 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim62Q80V85 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim62Q80V85 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim62Q80V85 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim62Q80V85 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim62Q80V85 Gm13559-201ENSMUST00000120476 863 ntBASIC17.82■□□□□ 0.44
Trim62Q80V85 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trim62Q80V85 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.82■□□□□ 0.44
Trim62Q80V85 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.82■□□□□ 0.44
Trim62Q80V85 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim62Q80V85 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trim62Q80V85 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim62Q80V85 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim62Q80V85 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trim62Q80V85 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.82■□□□□ 0.44
Trim62Q80V85 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim62Q80V85 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim62Q80V85 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim62Q80V85 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim62Q80V85 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.81■□□□□ 0.44
Trim62Q80V85 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim62Q80V85 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim62Q80V85 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.81■□□□□ 0.44
Trim62Q80V85 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Trim62Q80V85 Gm43799-201ENSMUST00000201845 579 ntBASIC17.81■□□□□ 0.44
Trim62Q80V85 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim62Q80V85 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim62Q80V85 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim62Q80V85 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim62Q80V85 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trim62Q80V85 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim62Q80V85 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim62Q80V85 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim62Q80V85 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim62Q80V85 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trim62Q80V85 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim62Q80V85 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim62Q80V85 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim62Q80V85 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim62Q80V85 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trim62Q80V85 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Trim62Q80V85 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim62Q80V85 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim62Q80V85 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.8■□□□□ 0.44
Trim62Q80V85 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim62Q80V85 Gm6433-201ENSMUST00000118634 875 ntBASIC17.8■□□□□ 0.44
Trim62Q80V85 Gm13474-201ENSMUST00000122466 815 ntBASIC17.8■□□□□ 0.44
Trim62Q80V85 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.8■□□□□ 0.44
Trim62Q80V85 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim62Q80V85 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim62Q80V85 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim62Q80V85 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim62Q80V85 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.8■□□□□ 0.44
Trim62Q80V85 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim62Q80V85 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim62Q80V85 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim62Q80V85 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trim62Q80V85 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim62Q80V85 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim62Q80V85 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim62Q80V85 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim62Q80V85 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim62Q80V85 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim62Q80V85 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim62Q80V85 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim62Q80V85 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim62Q80V85 Gm16061-201ENSMUST00000122167 857 ntBASIC17.79■□□□□ 0.44
Trim62Q80V85 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trim62Q80V85 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim62Q80V85 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim62Q80V85 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.79■□□□□ 0.44
Trim62Q80V85 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim62Q80V85 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim62Q80V85 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim62Q80V85 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim62Q80V85 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim62Q80V85 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trim62Q80V85 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trim62Q80V85 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim62Q80V85 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim62Q80V85 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.78■□□□□ 0.44
Trim62Q80V85 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim62Q80V85 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trim62Q80V85 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.78■□□□□ 0.44
Trim62Q80V85 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.78■□□□□ 0.44
Trim62Q80V85 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.78■□□□□ 0.44
Trim62Q80V85 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.78■□□□□ 0.44
Trim62Q80V85 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim62Q80V85 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim62Q80V85 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trim62Q80V85 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Trim62Q80V85 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trim62Q80V85 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim62Q80V85 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trim62Q80V85 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms