Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Ssx9Q6XAS3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssx9Q6XAS3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssx9Q6XAS3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssx9Q6XAS3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.16■□□□□ 0.34
Ssx9Q6XAS3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssx9Q6XAS3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssx9Q6XAS3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssx9Q6XAS3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssx9Q6XAS3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ssx9Q6XAS3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.16■□□□□ 0.34
Ssx9Q6XAS3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssx9Q6XAS3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssx9Q6XAS3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssx9Q6XAS3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssx9Q6XAS3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssx9Q6XAS3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssx9Q6XAS3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssx9Q6XAS3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssx9Q6XAS3 Gm12382-201ENSMUST00000122005 922 ntBASIC17.15■□□□□ 0.34
Ssx9Q6XAS3 Gm37856-201ENSMUST00000191634 999 ntBASIC17.15■□□□□ 0.34
Ssx9Q6XAS3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssx9Q6XAS3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ssx9Q6XAS3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ssx9Q6XAS3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ssx9Q6XAS3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ssx9Q6XAS3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ssx9Q6XAS3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Ssx9Q6XAS3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ssx9Q6XAS3 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.14■□□□□ 0.33
Ssx9Q6XAS3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Ssx9Q6XAS3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ssx9Q6XAS3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssx9Q6XAS3 Gm12527-201ENSMUST00000117967 564 ntBASIC17.14■□□□□ 0.33
Ssx9Q6XAS3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.14■□□□□ 0.33
Ssx9Q6XAS3 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.14■□□□□ 0.33
Ssx9Q6XAS3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.14■□□□□ 0.33
Ssx9Q6XAS3 Trmt13-210ENSMUST00000198454 880 ntBASIC17.14■□□□□ 0.33
Ssx9Q6XAS3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssx9Q6XAS3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssx9Q6XAS3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssx9Q6XAS3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssx9Q6XAS3 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.13■□□□□ 0.33
Ssx9Q6XAS3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssx9Q6XAS3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssx9Q6XAS3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssx9Q6XAS3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssx9Q6XAS3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssx9Q6XAS3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssx9Q6XAS3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ssx9Q6XAS3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.13■□□□□ 0.33
Ssx9Q6XAS3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.13■□□□□ 0.33
Ssx9Q6XAS3 Gm4974-201ENSMUST00000209974 875 ntBASIC17.13■□□□□ 0.33
Ssx9Q6XAS3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.13■□□□□ 0.33
Ssx9Q6XAS3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssx9Q6XAS3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ssx9Q6XAS3 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.13■□□□□ 0.33
Ssx9Q6XAS3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ssx9Q6XAS3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ssx9Q6XAS3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssx9Q6XAS3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssx9Q6XAS3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssx9Q6XAS3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssx9Q6XAS3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssx9Q6XAS3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ssx9Q6XAS3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.12■□□□□ 0.33
Ssx9Q6XAS3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ssx9Q6XAS3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.12■□□□□ 0.33
Ssx9Q6XAS3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.12■□□□□ 0.33
Ssx9Q6XAS3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ssx9Q6XAS3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssx9Q6XAS3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssx9Q6XAS3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssx9Q6XAS3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ssx9Q6XAS3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssx9Q6XAS3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ssx9Q6XAS3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssx9Q6XAS3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ssx9Q6XAS3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssx9Q6XAS3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ssx9Q6XAS3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssx9Q6XAS3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssx9Q6XAS3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssx9Q6XAS3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssx9Q6XAS3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssx9Q6XAS3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ssx9Q6XAS3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssx9Q6XAS3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ssx9Q6XAS3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.11■□□□□ 0.33
Ssx9Q6XAS3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.11■□□□□ 0.33
Ssx9Q6XAS3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ssx9Q6XAS3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ssx9Q6XAS3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ssx9Q6XAS3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ssx9Q6XAS3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssx9Q6XAS3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssx9Q6XAS3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssx9Q6XAS3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssx9Q6XAS3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssx9Q6XAS3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms