Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dhx40Q6PE54 Gm11643-201ENSMUST00000119578 864 ntBASIC19.13■□□□□ 0.65
Dhx40Q6PE54 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Dhx40Q6PE54 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Dhx40Q6PE54 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dhx40Q6PE54 Rab3c-203ENSMUST00000224180 967 ntBASIC19.13■□□□□ 0.65
Dhx40Q6PE54 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dhx40Q6PE54 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dhx40Q6PE54 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Dhx40Q6PE54 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.13■□□□□ 0.65
Dhx40Q6PE54 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dhx40Q6PE54 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dhx40Q6PE54 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.13■□□□□ 0.65
Dhx40Q6PE54 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dhx40Q6PE54 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dhx40Q6PE54 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Dhx40Q6PE54 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.12■□□□□ 0.65
Dhx40Q6PE54 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dhx40Q6PE54 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dhx40Q6PE54 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dhx40Q6PE54 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dhx40Q6PE54 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dhx40Q6PE54 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Dhx40Q6PE54 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dhx40Q6PE54 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Dhx40Q6PE54 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dhx40Q6PE54 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Dhx40Q6PE54 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dhx40Q6PE54 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dhx40Q6PE54 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Dhx40Q6PE54 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dhx40Q6PE54 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dhx40Q6PE54 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Dhx40Q6PE54 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dhx40Q6PE54 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dhx40Q6PE54 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Dhx40Q6PE54 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Dhx40Q6PE54 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.11■□□□□ 0.65
Dhx40Q6PE54 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Dhx40Q6PE54 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.11■□□□□ 0.65
Dhx40Q6PE54 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dhx40Q6PE54 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.11■□□□□ 0.65
Dhx40Q6PE54 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Dhx40Q6PE54 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dhx40Q6PE54 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dhx40Q6PE54 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dhx40Q6PE54 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Dhx40Q6PE54 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dhx40Q6PE54 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.1■□□□□ 0.65
Dhx40Q6PE54 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Dhx40Q6PE54 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dhx40Q6PE54 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Dhx40Q6PE54 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dhx40Q6PE54 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Dhx40Q6PE54 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.1■□□□□ 0.65
Dhx40Q6PE54 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dhx40Q6PE54 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.1■□□□□ 0.65
Dhx40Q6PE54 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.1■□□□□ 0.65
Dhx40Q6PE54 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Dhx40Q6PE54 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dhx40Q6PE54 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dhx40Q6PE54 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dhx40Q6PE54 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dhx40Q6PE54 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dhx40Q6PE54 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Dhx40Q6PE54 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Dhx40Q6PE54 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dhx40Q6PE54 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dhx40Q6PE54 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dhx40Q6PE54 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Dhx40Q6PE54 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Dhx40Q6PE54 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Dhx40Q6PE54 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Dhx40Q6PE54 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Dhx40Q6PE54 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Dhx40Q6PE54 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Dhx40Q6PE54 Gm27011-201ENSMUST00000182352 972 ntBASIC19.09■□□□□ 0.65
Dhx40Q6PE54 Mir6349-201ENSMUST00000184059 97 ntBASIC19.09■□□□□ 0.65
Dhx40Q6PE54 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Dhx40Q6PE54 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Dhx40Q6PE54 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Dhx40Q6PE54 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Dhx40Q6PE54 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Dhx40Q6PE54 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Dhx40Q6PE54 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Dhx40Q6PE54 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.09■□□□□ 0.65
Dhx40Q6PE54 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Dhx40Q6PE54 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Dhx40Q6PE54 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Dhx40Q6PE54 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Dhx40Q6PE54 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Dhx40Q6PE54 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Dhx40Q6PE54 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Dhx40Q6PE54 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Dhx40Q6PE54 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Dhx40Q6PE54 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.08■□□□□ 0.64
Dhx40Q6PE54 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Dhx40Q6PE54 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Dhx40Q6PE54 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Dhx40Q6PE54 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms