Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Krt42Q6IFX2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Krt42Q6IFX2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Krt42Q6IFX2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Krt42Q6IFX2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.73■□□□□ 0.43
Krt42Q6IFX2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Krt42Q6IFX2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Krt42Q6IFX2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Krt42Q6IFX2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Krt42Q6IFX2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Krt42Q6IFX2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Krt42Q6IFX2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Krt42Q6IFX2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Krt42Q6IFX2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Krt42Q6IFX2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Krt42Q6IFX2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Krt42Q6IFX2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Krt42Q6IFX2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Krt42Q6IFX2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Krt42Q6IFX2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Krt42Q6IFX2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Krt42Q6IFX2 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Krt42Q6IFX2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Krt42Q6IFX2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Krt42Q6IFX2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.72■□□□□ 0.43
Krt42Q6IFX2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Krt42Q6IFX2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Krt42Q6IFX2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Krt42Q6IFX2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Krt42Q6IFX2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Krt42Q6IFX2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Krt42Q6IFX2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Krt42Q6IFX2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.71■□□□□ 0.43
Krt42Q6IFX2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Krt42Q6IFX2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Krt42Q6IFX2 Gm13234-201ENSMUST00000120010 747 ntBASIC17.71■□□□□ 0.43
Krt42Q6IFX2 Gm45417-201ENSMUST00000209533 758 ntBASIC17.71■□□□□ 0.43
Krt42Q6IFX2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Krt42Q6IFX2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Krt42Q6IFX2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Krt42Q6IFX2 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.71■□□□□ 0.42
Krt42Q6IFX2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt42Q6IFX2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt42Q6IFX2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt42Q6IFX2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt42Q6IFX2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt42Q6IFX2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Krt42Q6IFX2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.7■□□□□ 0.42
Krt42Q6IFX2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt42Q6IFX2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt42Q6IFX2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Krt42Q6IFX2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Krt42Q6IFX2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt42Q6IFX2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt42Q6IFX2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Krt42Q6IFX2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt42Q6IFX2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Krt42Q6IFX2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt42Q6IFX2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt42Q6IFX2 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt42Q6IFX2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Krt42Q6IFX2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Krt42Q6IFX2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Krt42Q6IFX2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Krt42Q6IFX2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Krt42Q6IFX2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Krt42Q6IFX2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.69■□□□□ 0.42
Krt42Q6IFX2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.69■□□□□ 0.42
Krt42Q6IFX2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Krt42Q6IFX2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Krt42Q6IFX2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.69■□□□□ 0.42
Krt42Q6IFX2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Krt42Q6IFX2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Krt42Q6IFX2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Krt42Q6IFX2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.69■□□□□ 0.42
Krt42Q6IFX2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Krt42Q6IFX2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Krt42Q6IFX2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Krt42Q6IFX2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Krt42Q6IFX2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Krt42Q6IFX2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Krt42Q6IFX2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Krt42Q6IFX2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Krt42Q6IFX2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt42Q6IFX2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt42Q6IFX2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt42Q6IFX2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt42Q6IFX2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt42Q6IFX2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt42Q6IFX2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt42Q6IFX2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt42Q6IFX2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.68■□□□□ 0.42
Krt42Q6IFX2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Krt42Q6IFX2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
Krt42Q6IFX2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt42Q6IFX2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt42Q6IFX2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt42Q6IFX2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt42Q6IFX2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt42Q6IFX2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms