Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VclQ64727 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
VclQ64727 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VclQ64727 Gm37025-201ENSMUST00000195159 829 ntBASIC16.94■□□□□ 0.3
VclQ64727 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VclQ64727 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VclQ64727 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
VclQ64727 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VclQ64727 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VclQ64727 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VclQ64727 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VclQ64727 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
VclQ64727 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VclQ64727 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VclQ64727 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
VclQ64727 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VclQ64727 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VclQ64727 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
VclQ64727 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.93■□□□□ 0.3
VclQ64727 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.93■□□□□ 0.3
VclQ64727 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.93■□□□□ 0.3
VclQ64727 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VclQ64727 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VclQ64727 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VclQ64727 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VclQ64727 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VclQ64727 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VclQ64727 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VclQ64727 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VclQ64727 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VclQ64727 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VclQ64727 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VclQ64727 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VclQ64727 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VclQ64727 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VclQ64727 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.92■□□□□ 0.3
VclQ64727 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.92■□□□□ 0.3
VclQ64727 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.92■□□□□ 0.3
VclQ64727 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.92■□□□□ 0.3
VclQ64727 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VclQ64727 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VclQ64727 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VclQ64727 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
VclQ64727 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VclQ64727 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VclQ64727 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
VclQ64727 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VclQ64727 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VclQ64727 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VclQ64727 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.92■□□□□ 0.3
VclQ64727 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
VclQ64727 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VclQ64727 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VclQ64727 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VclQ64727 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.91■□□□□ 0.3
VclQ64727 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VclQ64727 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VclQ64727 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VclQ64727 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VclQ64727 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VclQ64727 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VclQ64727 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VclQ64727 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VclQ64727 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
VclQ64727 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.91■□□□□ 0.3
VclQ64727 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VclQ64727 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VclQ64727 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
VclQ64727 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
VclQ64727 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
VclQ64727 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.9■□□□□ 0.3
VclQ64727 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VclQ64727 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VclQ64727 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VclQ64727 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VclQ64727 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VclQ64727 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
VclQ64727 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VclQ64727 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VclQ64727 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VclQ64727 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VclQ64727 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VclQ64727 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VclQ64727 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VclQ64727 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VclQ64727 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VclQ64727 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
VclQ64727 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
VclQ64727 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
VclQ64727 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
VclQ64727 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
VclQ64727 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.89■□□□□ 0.29
VclQ64727 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VclQ64727 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VclQ64727 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VclQ64727 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VclQ64727 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VclQ64727 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VclQ64727 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VclQ64727 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms