Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn9aQ62205 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Scn9aQ62205 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn9aQ62205 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Scn9aQ62205 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.29■□□□□ 0.84
Scn9aQ62205 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Scn9aQ62205 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn9aQ62205 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Scn9aQ62205 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Scn9aQ62205 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Scn9aQ62205 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scn9aQ62205 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn9aQ62205 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn9aQ62205 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC20.28■□□□□ 0.84
Scn9aQ62205 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.28■□□□□ 0.84
Scn9aQ62205 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn9aQ62205 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn9aQ62205 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.28■□□□□ 0.84
Scn9aQ62205 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.28■□□□□ 0.84
Scn9aQ62205 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn9aQ62205 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Scn9aQ62205 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn9aQ62205 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn9aQ62205 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn9aQ62205 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.27■□□□□ 0.84
Scn9aQ62205 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.27■□□□□ 0.84
Scn9aQ62205 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scn9aQ62205 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn9aQ62205 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Scn9aQ62205 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn9aQ62205 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn9aQ62205 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn9aQ62205 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn9aQ62205 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Scn9aQ62205 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Scn9aQ62205 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Scn9aQ62205 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Scn9aQ62205 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC20.26■□□□□ 0.83
Scn9aQ62205 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC20.26■□□□□ 0.83
Scn9aQ62205 Mir5131-201ENSMUST00000175426 93 ntBASIC20.26■□□□□ 0.83
Scn9aQ62205 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.26■□□□□ 0.83
Scn9aQ62205 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn9aQ62205 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Scn9aQ62205 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Scn9aQ62205 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn9aQ62205 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scn9aQ62205 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn9aQ62205 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn9aQ62205 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scn9aQ62205 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scn9aQ62205 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Scn9aQ62205 Gm11594-201ENSMUST00000122313 162 ntBASIC20.26■□□□□ 0.83
Scn9aQ62205 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Scn9aQ62205 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn9aQ62205 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn9aQ62205 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scn9aQ62205 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn9aQ62205 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn9aQ62205 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn9aQ62205 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn9aQ62205 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn9aQ62205 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn9aQ62205 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn9aQ62205 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn9aQ62205 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn9aQ62205 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC20.25■□□□□ 0.83
Scn9aQ62205 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn9aQ62205 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn9aQ62205 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn9aQ62205 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn9aQ62205 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn9aQ62205 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Scn9aQ62205 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn9aQ62205 AC153794.1-201ENSMUST00000169148 126 ntBASIC20.25■□□□□ 0.83
Scn9aQ62205 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC20.25■□□□□ 0.83
Scn9aQ62205 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn9aQ62205 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn9aQ62205 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn9aQ62205 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.24■□□□□ 0.83
Scn9aQ62205 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scn9aQ62205 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.24■□□□□ 0.83
Scn9aQ62205 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn9aQ62205 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn9aQ62205 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn9aQ62205 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn9aQ62205 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn9aQ62205 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn9aQ62205 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.23■□□□□ 0.83
Scn9aQ62205 Gm12350-201ENSMUST00000121208 462 ntBASIC20.23■□□□□ 0.83
Scn9aQ62205 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC20.23■□□□□ 0.83
Scn9aQ62205 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC20.23■□□□□ 0.83
Scn9aQ62205 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
Scn9aQ62205 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.23■□□□□ 0.83
Scn9aQ62205 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn9aQ62205 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scn9aQ62205 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Scn9aQ62205 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn9aQ62205 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn9aQ62205 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn9aQ62205 Gm11779-201ENSMUST00000118541 368 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms