Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ift88Q61371 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ift88Q61371 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ift88Q61371 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.06■□□□□ 0.64
Ift88Q61371 Gm5408-201ENSMUST00000197998 747 ntBASIC19.06■□□□□ 0.64
Ift88Q61371 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ift88Q61371 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Ift88Q61371 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.06■□□□□ 0.64
Ift88Q61371 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Ift88Q61371 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Ift88Q61371 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ift88Q61371 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.06■□□□□ 0.64
Ift88Q61371 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ift88Q61371 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ift88Q61371 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.06■□□□□ 0.64
Ift88Q61371 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.06■□□□□ 0.64
Ift88Q61371 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ift88Q61371 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.05■□□□□ 0.64
Ift88Q61371 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ift88Q61371 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ift88Q61371 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ift88Q61371 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ift88Q61371 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.05■□□□□ 0.64
Ift88Q61371 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.05■□□□□ 0.64
Ift88Q61371 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ift88Q61371 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ift88Q61371 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ift88Q61371 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ift88Q61371 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ift88Q61371 Gm15375-201ENSMUST00000119510 849 ntBASIC19.05■□□□□ 0.64
Ift88Q61371 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.05■□□□□ 0.64
Ift88Q61371 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Ift88Q61371 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Ift88Q61371 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ift88Q61371 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ift88Q61371 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ift88Q61371 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ift88Q61371 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ift88Q61371 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ift88Q61371 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ift88Q61371 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ift88Q61371 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ift88Q61371 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ift88Q61371 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ift88Q61371 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ift88Q61371 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ift88Q61371 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ift88Q61371 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ift88Q61371 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ift88Q61371 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ift88Q61371 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ift88Q61371 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ift88Q61371 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ift88Q61371 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ift88Q61371 Gm6576-201ENSMUST00000169678 883 ntBASIC19.04■□□□□ 0.64
Ift88Q61371 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ift88Q61371 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ift88Q61371 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ift88Q61371 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ift88Q61371 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ift88Q61371 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ift88Q61371 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.03■□□□□ 0.64
Ift88Q61371 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.03■□□□□ 0.64
Ift88Q61371 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ift88Q61371 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ift88Q61371 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.03■□□□□ 0.64
Ift88Q61371 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ift88Q61371 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Ift88Q61371 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ift88Q61371 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ift88Q61371 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ift88Q61371 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ift88Q61371 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ift88Q61371 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ift88Q61371 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ift88Q61371 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.02■□□□□ 0.64
Ift88Q61371 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ift88Q61371 Dio3-201ENSMUST00000097228 1449 ntBASIC19.02■□□□□ 0.64
Ift88Q61371 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Ift88Q61371 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ift88Q61371 Gm12933-201ENSMUST00000120203 872 ntBASIC19.02■□□□□ 0.64
Ift88Q61371 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ift88Q61371 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ift88Q61371 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.02■□□□□ 0.64
Ift88Q61371 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Ift88Q61371 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ift88Q61371 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.02■□□□□ 0.64
Ift88Q61371 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ift88Q61371 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ift88Q61371 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ift88Q61371 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ift88Q61371 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.02■□□□□ 0.63
Ift88Q61371 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ift88Q61371 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ift88Q61371 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ift88Q61371 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ift88Q61371 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ift88Q61371 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Ift88Q61371 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ift88Q61371 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms