Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.18■□□□□ 0.18
Tnfaip3Q60769 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfaip3Q60769 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.18■□□□□ 0.18
Tnfaip3Q60769 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.18■□□□□ 0.18
Tnfaip3Q60769 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.18■□□□□ 0.18
Tnfaip3Q60769 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Tnfaip3Q60769 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfaip3Q60769 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfaip3Q60769 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfaip3Q60769 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.18■□□□□ 0.18
Tnfaip3Q60769 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Tnfaip3Q60769 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfaip3Q60769 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfaip3Q60769 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfaip3Q60769 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfaip3Q60769 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfaip3Q60769 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfaip3Q60769 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.17■□□□□ 0.18
Tnfaip3Q60769 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfaip3Q60769 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.17■□□□□ 0.18
Tnfaip3Q60769 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfaip3Q60769 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Tnfaip3Q60769 Gm2274-201ENSMUST00000184539 609 ntBASIC16.17■□□□□ 0.18
Tnfaip3Q60769 Gm7791-201ENSMUST00000219066 539 ntBASIC16.17■□□□□ 0.18
Tnfaip3Q60769 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfaip3Q60769 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfaip3Q60769 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfaip3Q60769 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfaip3Q60769 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfaip3Q60769 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfaip3Q60769 Gm10231-201ENSMUST00000181584 441 ntBASIC16.16■□□□□ 0.18
Tnfaip3Q60769 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfaip3Q60769 Gm10175-202ENSMUST00000208752 441 ntBASIC16.16■□□□□ 0.18
Tnfaip3Q60769 Il3ra-202ENSMUST00000223589 738 ntBASIC16.16■□□□□ 0.18
Tnfaip3Q60769 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfaip3Q60769 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfaip3Q60769 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Tnfaip3Q60769 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfaip3Q60769 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfaip3Q60769 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfaip3Q60769 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfaip3Q60769 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfaip3Q60769 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Tnfaip3Q60769 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfaip3Q60769 Gm17661-201ENSMUST00000170317 270 ntBASIC16.15■□□□□ 0.18
Tnfaip3Q60769 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfaip3Q60769 Gm18959-201ENSMUST00000208954 655 ntBASIC16.15■□□□□ 0.18
Tnfaip3Q60769 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Tnfaip3Q60769 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfaip3Q60769 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfaip3Q60769 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfaip3Q60769 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfaip3Q60769 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfaip3Q60769 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Tnfaip3Q60769 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfaip3Q60769 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.15■□□□□ 0.18
Tnfaip3Q60769 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfaip3Q60769 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfaip3Q60769 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Tnfaip3Q60769 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Tnfaip3Q60769 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfaip3Q60769 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfaip3Q60769 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfaip3Q60769 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfaip3Q60769 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.14■□□□□ 0.17
Tnfaip3Q60769 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.14■□□□□ 0.17
Tnfaip3Q60769 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.14■□□□□ 0.17
Tnfaip3Q60769 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfaip3Q60769 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Tnfaip3Q60769 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfaip3Q60769 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfaip3Q60769 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.14■□□□□ 0.17
Tnfaip3Q60769 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfaip3Q60769 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfaip3Q60769 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Tnfaip3Q60769 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfaip3Q60769 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfaip3Q60769 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Tnfaip3Q60769 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfaip3Q60769 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.14■□□□□ 0.17
Tnfaip3Q60769 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Tnfaip3Q60769 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfaip3Q60769 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.13■□□□□ 0.17
Tnfaip3Q60769 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfaip3Q60769 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfaip3Q60769 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfaip3Q60769 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfaip3Q60769 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Tnfaip3Q60769 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfaip3Q60769 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfaip3Q60769 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfaip3Q60769 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.13■□□□□ 0.17
Tnfaip3Q60769 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfaip3Q60769 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfaip3Q60769 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.13■□□□□ 0.17
Tnfaip3Q60769 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Tnfaip3Q60769 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfaip3Q60769 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfaip3Q60769 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.13■□□□□ 0.17
Tnfaip3Q60769 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms