Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav3-3Q5R1C3 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trav3-3Q5R1C3 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav3-3Q5R1C3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav3-3Q5R1C3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-3Q5R1C3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-3Q5R1C3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-3Q5R1C3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav3-3Q5R1C3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-3Q5R1C3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC12.95□□□□□ -0.34
Trav3-3Q5R1C3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC12.95□□□□□ -0.34
Trav3-3Q5R1C3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav3-3Q5R1C3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-3Q5R1C3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-3Q5R1C3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-3Q5R1C3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav3-3Q5R1C3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-3Q5R1C3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-3Q5R1C3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-3Q5R1C3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav3-3Q5R1C3 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav3-3Q5R1C3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-3Q5R1C3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-3Q5R1C3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-3Q5R1C3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-3Q5R1C3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-3Q5R1C3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-3Q5R1C3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-3Q5R1C3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-3Q5R1C3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-3Q5R1C3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-3Q5R1C3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-3Q5R1C3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-3Q5R1C3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-3Q5R1C3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-3Q5R1C3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-3Q5R1C3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-3Q5R1C3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trav3-3Q5R1C3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-3Q5R1C3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-3Q5R1C3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Trav3-3Q5R1C3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC12.93□□□□□ -0.34
Trav3-3Q5R1C3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-3Q5R1C3 Gm13241-201ENSMUST00000094493 780 ntBASIC12.93□□□□□ -0.34
Trav3-3Q5R1C3 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-3Q5R1C3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-3Q5R1C3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-3Q5R1C3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav3-3Q5R1C3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-3Q5R1C3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav3-3Q5R1C3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-3Q5R1C3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-3Q5R1C3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-3Q5R1C3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-3Q5R1C3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-3Q5R1C3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-3Q5R1C3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-3Q5R1C3 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.92□□□□□ -0.34
Trav3-3Q5R1C3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-3Q5R1C3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav3-3Q5R1C3 Gm43137-201ENSMUST00000198052 594 ntBASIC12.92□□□□□ -0.34
Trav3-3Q5R1C3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-3Q5R1C3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-3Q5R1C3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav3-3Q5R1C3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-3Q5R1C3 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-3Q5R1C3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-3Q5R1C3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms