Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim80Q3V061 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim80Q3V061 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Trim80Q3V061 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim80Q3V061 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim80Q3V061 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim80Q3V061 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim80Q3V061 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trim80Q3V061 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim80Q3V061 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trim80Q3V061 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim80Q3V061 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Trim80Q3V061 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim80Q3V061 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
Trim80Q3V061 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trim80Q3V061 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim80Q3V061 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trim80Q3V061 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim80Q3V061 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim80Q3V061 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.78■□□□□ 0.44
Trim80Q3V061 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim80Q3V061 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.78■□□□□ 0.44
Trim80Q3V061 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim80Q3V061 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim80Q3V061 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.78■□□□□ 0.44
Trim80Q3V061 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim80Q3V061 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim80Q3V061 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim80Q3V061 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim80Q3V061 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim80Q3V061 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim80Q3V061 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim80Q3V061 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim80Q3V061 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim80Q3V061 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim80Q3V061 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trim80Q3V061 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.77■□□□□ 0.44
Trim80Q3V061 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Trim80Q3V061 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim80Q3V061 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim80Q3V061 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim80Q3V061 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.77■□□□□ 0.44
Trim80Q3V061 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim80Q3V061 Trmt13-210ENSMUST00000198454 880 ntBASIC17.77■□□□□ 0.44
Trim80Q3V061 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim80Q3V061 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim80Q3V061 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim80Q3V061 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Trim80Q3V061 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim80Q3V061 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Trim80Q3V061 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trim80Q3V061 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
Trim80Q3V061 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim80Q3V061 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim80Q3V061 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim80Q3V061 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trim80Q3V061 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim80Q3V061 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim80Q3V061 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trim80Q3V061 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.76■□□□□ 0.43
Trim80Q3V061 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim80Q3V061 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim80Q3V061 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.76■□□□□ 0.43
Trim80Q3V061 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim80Q3V061 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim80Q3V061 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trim80Q3V061 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim80Q3V061 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim80Q3V061 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim80Q3V061 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim80Q3V061 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim80Q3V061 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim80Q3V061 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim80Q3V061 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim80Q3V061 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim80Q3V061 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim80Q3V061 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim80Q3V061 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim80Q3V061 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.75■□□□□ 0.43
Trim80Q3V061 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim80Q3V061 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.75■□□□□ 0.43
Trim80Q3V061 Gm26524-201ENSMUST00000192339 390 ntBASIC17.75■□□□□ 0.43
Trim80Q3V061 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.75■□□□□ 0.43
Trim80Q3V061 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.75■□□□□ 0.43
Trim80Q3V061 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim80Q3V061 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim80Q3V061 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim80Q3V061 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim80Q3V061 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trim80Q3V061 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim80Q3V061 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trim80Q3V061 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim80Q3V061 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim80Q3V061 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim80Q3V061 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim80Q3V061 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim80Q3V061 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim80Q3V061 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim80Q3V061 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim80Q3V061 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms