Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Spg7Q3ULF4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Spg7Q3ULF4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Spg7Q3ULF4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Spg7Q3ULF4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Spg7Q3ULF4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Spg7Q3ULF4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Spg7Q3ULF4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Spg7Q3ULF4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Spg7Q3ULF4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Spg7Q3ULF4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Spg7Q3ULF4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Spg7Q3ULF4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Spg7Q3ULF4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Spg7Q3ULF4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.51■□□□□ 0.87
Spg7Q3ULF4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Spg7Q3ULF4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Spg7Q3ULF4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Spg7Q3ULF4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Spg7Q3ULF4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Spg7Q3ULF4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Spg7Q3ULF4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Spg7Q3ULF4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg7Q3ULF4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg7Q3ULF4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg7Q3ULF4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Spg7Q3ULF4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Spg7Q3ULF4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg7Q3ULF4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Spg7Q3ULF4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.5■□□□□ 0.87
Spg7Q3ULF4 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.5■□□□□ 0.87
Spg7Q3ULF4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg7Q3ULF4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg7Q3ULF4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg7Q3ULF4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Spg7Q3ULF4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg7Q3ULF4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg7Q3ULF4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg7Q3ULF4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg7Q3ULF4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg7Q3ULF4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Spg7Q3ULF4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Spg7Q3ULF4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Spg7Q3ULF4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.49■□□□□ 0.87
Spg7Q3ULF4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Spg7Q3ULF4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Spg7Q3ULF4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.49■□□□□ 0.87
Spg7Q3ULF4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Spg7Q3ULF4 Gm11950-201ENSMUST00000121615 838 ntBASIC20.49■□□□□ 0.87
Spg7Q3ULF4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Spg7Q3ULF4 Gm37722-201ENSMUST00000193757 208 ntBASIC20.49■□□□□ 0.87
Spg7Q3ULF4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Spg7Q3ULF4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.49■□□□□ 0.87
Spg7Q3ULF4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Spg7Q3ULF4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Spg7Q3ULF4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Spg7Q3ULF4 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.49■□□□□ 0.87
Spg7Q3ULF4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Spg7Q3ULF4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Spg7Q3ULF4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Spg7Q3ULF4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Spg7Q3ULF4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Spg7Q3ULF4 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.48■□□□□ 0.87
Spg7Q3ULF4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Spg7Q3ULF4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Spg7Q3ULF4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Spg7Q3ULF4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.48■□□□□ 0.87
Spg7Q3ULF4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Spg7Q3ULF4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Spg7Q3ULF4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Spg7Q3ULF4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Spg7Q3ULF4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Spg7Q3ULF4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Spg7Q3ULF4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Spg7Q3ULF4 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Spg7Q3ULF4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Spg7Q3ULF4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Spg7Q3ULF4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Spg7Q3ULF4 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Spg7Q3ULF4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.47■□□□□ 0.87
Spg7Q3ULF4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Spg7Q3ULF4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Spg7Q3ULF4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Spg7Q3ULF4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Spg7Q3ULF4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Spg7Q3ULF4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Spg7Q3ULF4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.46■□□□□ 0.87
Spg7Q3ULF4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Spg7Q3ULF4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Spg7Q3ULF4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Spg7Q3ULF4 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.46■□□□□ 0.87
Spg7Q3ULF4 Gm6623-201ENSMUST00000173570 544 ntBASIC20.46■□□□□ 0.87
Spg7Q3ULF4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.46■□□□□ 0.87
Spg7Q3ULF4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Spg7Q3ULF4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Spg7Q3ULF4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Spg7Q3ULF4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Spg7Q3ULF4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Spg7Q3ULF4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Spg7Q3ULF4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms