Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.43■□□□□ 0.86
Col5a2Q3U962 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col5a2Q3U962 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col5a2Q3U962 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col5a2Q3U962 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col5a2Q3U962 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col5a2Q3U962 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Col5a2Q3U962 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col5a2Q3U962 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col5a2Q3U962 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col5a2Q3U962 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col5a2Q3U962 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Col5a2Q3U962 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col5a2Q3U962 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col5a2Q3U962 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col5a2Q3U962 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col5a2Q3U962 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col5a2Q3U962 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col5a2Q3U962 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col5a2Q3U962 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Col5a2Q3U962 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col5a2Q3U962 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col5a2Q3U962 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.42■□□□□ 0.86
Col5a2Q3U962 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col5a2Q3U962 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col5a2Q3U962 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col5a2Q3U962 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col5a2Q3U962 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Col5a2Q3U962 Gm13312-201ENSMUST00000119631 718 ntBASIC20.42■□□□□ 0.86
Col5a2Q3U962 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Col5a2Q3U962 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col5a2Q3U962 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col5a2Q3U962 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col5a2Q3U962 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC20.42■□□□□ 0.86
Col5a2Q3U962 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col5a2Q3U962 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col5a2Q3U962 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Col5a2Q3U962 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.41■□□□□ 0.86
Col5a2Q3U962 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col5a2Q3U962 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col5a2Q3U962 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Col5a2Q3U962 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col5a2Q3U962 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col5a2Q3U962 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col5a2Q3U962 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col5a2Q3U962 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Col5a2Q3U962 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Col5a2Q3U962 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col5a2Q3U962 Rprl3-201ENSMUST00000157400 290 ntBASIC20.4■□□□□ 0.86
Col5a2Q3U962 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC20.4■□□□□ 0.86
Col5a2Q3U962 Gm10060-201ENSMUST00000212002 111 ntBASIC20.4■□□□□ 0.86
Col5a2Q3U962 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col5a2Q3U962 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col5a2Q3U962 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Col5a2Q3U962 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col5a2Q3U962 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col5a2Q3U962 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col5a2Q3U962 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.39■□□□□ 0.86
Col5a2Q3U962 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC20.39■□□□□ 0.85
Col5a2Q3U962 Gm11594-201ENSMUST00000122313 162 ntBASIC20.39■□□□□ 0.85
Col5a2Q3U962 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC20.39■□□□□ 0.85
Col5a2Q3U962 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col5a2Q3U962 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col5a2Q3U962 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col5a2Q3U962 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col5a2Q3U962 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col5a2Q3U962 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.39■□□□□ 0.85
Col5a2Q3U962 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Col5a2Q3U962 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col5a2Q3U962 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col5a2Q3U962 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col5a2Q3U962 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Col5a2Q3U962 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.39■□□□□ 0.85
Col5a2Q3U962 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC20.39■□□□□ 0.85
Col5a2Q3U962 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col5a2Q3U962 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col5a2Q3U962 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col5a2Q3U962 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC20.38■□□□□ 0.85
Col5a2Q3U962 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col5a2Q3U962 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.38■□□□□ 0.85
Col5a2Q3U962 Gm44450-201ENSMUST00000199528 114 ntBASIC20.38■□□□□ 0.85
Col5a2Q3U962 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col5a2Q3U962 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col5a2Q3U962 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col5a2Q3U962 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col5a2Q3U962 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.38■□□□□ 0.85
Col5a2Q3U962 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col5a2Q3U962 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col5a2Q3U962 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Col5a2Q3U962 AC154621.1-201ENSMUST00000226155 1119 ntBASIC20.37■□□□□ 0.85
Col5a2Q3U962 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col5a2Q3U962 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col5a2Q3U962 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col5a2Q3U962 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col5a2Q3U962 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Col5a2Q3U962 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Col5a2Q3U962 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col5a2Q3U962 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col5a2Q3U962 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col5a2Q3U962 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms