Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shcbp1lQ3TTP0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shcbp1lQ3TTP0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shcbp1lQ3TTP0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shcbp1lQ3TTP0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shcbp1lQ3TTP0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shcbp1lQ3TTP0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shcbp1lQ3TTP0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Shcbp1lQ3TTP0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.35■□□□□ 0.37
Shcbp1lQ3TTP0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Shcbp1lQ3TTP0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Shcbp1lQ3TTP0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shcbp1lQ3TTP0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.35■□□□□ 0.37
Shcbp1lQ3TTP0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Shcbp1lQ3TTP0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shcbp1lQ3TTP0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shcbp1lQ3TTP0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.35■□□□□ 0.37
Shcbp1lQ3TTP0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shcbp1lQ3TTP0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shcbp1lQ3TTP0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Shcbp1lQ3TTP0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shcbp1lQ3TTP0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Shcbp1lQ3TTP0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shcbp1lQ3TTP0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shcbp1lQ3TTP0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.34■□□□□ 0.37
Shcbp1lQ3TTP0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.34■□□□□ 0.37
Shcbp1lQ3TTP0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Shcbp1lQ3TTP0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shcbp1lQ3TTP0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shcbp1lQ3TTP0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shcbp1lQ3TTP0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shcbp1lQ3TTP0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Shcbp1lQ3TTP0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Shcbp1lQ3TTP0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Shcbp1lQ3TTP0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Shcbp1lQ3TTP0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shcbp1lQ3TTP0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shcbp1lQ3TTP0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shcbp1lQ3TTP0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shcbp1lQ3TTP0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shcbp1lQ3TTP0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shcbp1lQ3TTP0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shcbp1lQ3TTP0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Shcbp1lQ3TTP0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Shcbp1lQ3TTP0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.33■□□□□ 0.36
Shcbp1lQ3TTP0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Shcbp1lQ3TTP0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.33■□□□□ 0.36
Shcbp1lQ3TTP0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shcbp1lQ3TTP0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Shcbp1lQ3TTP0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shcbp1lQ3TTP0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.33■□□□□ 0.36
Shcbp1lQ3TTP0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shcbp1lQ3TTP0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shcbp1lQ3TTP0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shcbp1lQ3TTP0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Shcbp1lQ3TTP0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shcbp1lQ3TTP0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shcbp1lQ3TTP0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Shcbp1lQ3TTP0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Shcbp1lQ3TTP0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shcbp1lQ3TTP0 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.32■□□□□ 0.36
Shcbp1lQ3TTP0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shcbp1lQ3TTP0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shcbp1lQ3TTP0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shcbp1lQ3TTP0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shcbp1lQ3TTP0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shcbp1lQ3TTP0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.32■□□□□ 0.36
Shcbp1lQ3TTP0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shcbp1lQ3TTP0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.32■□□□□ 0.36
Shcbp1lQ3TTP0 Mir5130-201ENSMUST00000175160 84 ntBASIC17.32■□□□□ 0.36
Shcbp1lQ3TTP0 Gm9731-201ENSMUST00000209480 747 ntBASIC17.32■□□□□ 0.36
Shcbp1lQ3TTP0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shcbp1lQ3TTP0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shcbp1lQ3TTP0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shcbp1lQ3TTP0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shcbp1lQ3TTP0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shcbp1lQ3TTP0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Shcbp1lQ3TTP0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Shcbp1lQ3TTP0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shcbp1lQ3TTP0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Shcbp1lQ3TTP0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shcbp1lQ3TTP0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shcbp1lQ3TTP0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shcbp1lQ3TTP0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shcbp1lQ3TTP0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shcbp1lQ3TTP0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shcbp1lQ3TTP0 Idnk-204ENSMUST00000226010 1898 ntBASIC17.31■□□□□ 0.36
Shcbp1lQ3TTP0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shcbp1lQ3TTP0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shcbp1lQ3TTP0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Shcbp1lQ3TTP0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Shcbp1lQ3TTP0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Shcbp1lQ3TTP0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Shcbp1lQ3TTP0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shcbp1lQ3TTP0 Gm7791-201ENSMUST00000219066 539 ntBASIC17.31■□□□□ 0.36
Shcbp1lQ3TTP0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Shcbp1lQ3TTP0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shcbp1lQ3TTP0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Shcbp1lQ3TTP0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shcbp1lQ3TTP0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms