Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Ush2AQ2QI47 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Ush2AQ2QI47 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC9.21□□□□□ -0.93
Ush2AQ2QI47 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Ush2AQ2QI47 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.93
Ush2AQ2QI47 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC9.21□□□□□ -0.93
Ush2AQ2QI47 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC9.21□□□□□ -0.93
Ush2AQ2QI47 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Ush2AQ2QI47 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Ush2AQ2QI47 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Ush2AQ2QI47 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC9.21□□□□□ -0.94
Ush2AQ2QI47 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Ush2AQ2QI47 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Ush2AQ2QI47 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Ush2AQ2QI47 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Ush2AQ2QI47 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC9.21□□□□□ -0.94
Ush2AQ2QI47 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Ush2AQ2QI47 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC9.21□□□□□ -0.94
Ush2AQ2QI47 Gm43630-201ENSMUST00000201550 776 ntBASIC9.21□□□□□ -0.94
Ush2AQ2QI47 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC9.21□□□□□ -0.94
Ush2AQ2QI47 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Ush2AQ2QI47 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC9.2□□□□□ -0.94
Ush2AQ2QI47 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ush2AQ2QI47 Rncr4-201ENSMUST00000194541 2234 ntBASIC9.2□□□□□ -0.94
Ush2AQ2QI47 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Ush2AQ2QI47 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ush2AQ2QI47 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Ush2AQ2QI47 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Ush2AQ2QI47 Gm11336-201ENSMUST00000118168 334 ntBASIC9.2□□□□□ -0.94
Ush2AQ2QI47 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Ush2AQ2QI47 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Ush2AQ2QI47 AC159295.1-201ENSMUST00000225326 940 ntBASIC9.2□□□□□ -0.94
Ush2AQ2QI47 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ush2AQ2QI47 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ush2AQ2QI47 Gm9899-201ENSMUST00000065519 555 ntBASIC9.2□□□□□ -0.94
Ush2AQ2QI47 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Ush2AQ2QI47 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Ush2AQ2QI47 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ush2AQ2QI47 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ush2AQ2QI47 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Ush2AQ2QI47 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ush2AQ2QI47 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ush2AQ2QI47 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ush2AQ2QI47 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ush2AQ2QI47 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Ush2AQ2QI47 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ush2AQ2QI47 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Ush2AQ2QI47 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Ush2AQ2QI47 Gm27622-201ENSMUST00000183779 60 ntBASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Gm7222-201ENSMUST00000117512 906 ntBASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Gm11873-201ENSMUST00000117877 1304 ntBASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Gm26766-202ENSMUST00000227544 2347 ntBASIC9.19□□□□□ -0.94
Ush2AQ2QI47 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC9.18□□□□□ -0.94
Ush2AQ2QI47 Gm25948-201ENSMUST00000175334 112 ntBASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms