Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.42■□□□□ 0.38
ThraP63058 Gm42545-201ENSMUST00000202755 922 ntBASIC17.42■□□□□ 0.38
ThraP63058 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ThraP63058 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ThraP63058 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ThraP63058 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ThraP63058 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ThraP63058 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ThraP63058 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ThraP63058 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ThraP63058 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ThraP63058 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ThraP63058 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ThraP63058 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.41■□□□□ 0.38
ThraP63058 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ThraP63058 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ThraP63058 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ThraP63058 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ThraP63058 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.41■□□□□ 0.38
ThraP63058 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.41■□□□□ 0.38
ThraP63058 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ThraP63058 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ThraP63058 Gm21814-202ENSMUST00000203277 873 ntBASIC17.41■□□□□ 0.38
ThraP63058 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.41■□□□□ 0.38
ThraP63058 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ThraP63058 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ThraP63058 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ThraP63058 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ThraP63058 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ThraP63058 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ThraP63058 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ThraP63058 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ThraP63058 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ThraP63058 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ThraP63058 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ThraP63058 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.4■□□□□ 0.38
ThraP63058 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ThraP63058 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ThraP63058 Gm43799-201ENSMUST00000201845 579 ntBASIC17.4■□□□□ 0.38
ThraP63058 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ThraP63058 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ThraP63058 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ThraP63058 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ThraP63058 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ThraP63058 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ThraP63058 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.39■□□□□ 0.38
ThraP63058 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ThraP63058 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.38
ThraP63058 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.39■□□□□ 0.38
ThraP63058 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ThraP63058 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
ThraP63058 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ThraP63058 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.39■□□□□ 0.37
ThraP63058 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ThraP63058 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ThraP63058 Gm37292-201ENSMUST00000192062 758 ntBASIC17.39■□□□□ 0.37
ThraP63058 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.39■□□□□ 0.37
ThraP63058 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.39■□□□□ 0.37
ThraP63058 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.39■□□□□ 0.37
ThraP63058 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.39■□□□□ 0.37
ThraP63058 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ThraP63058 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ThraP63058 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ThraP63058 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ThraP63058 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ThraP63058 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ThraP63058 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.38■□□□□ 0.37
ThraP63058 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ThraP63058 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
ThraP63058 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ThraP63058 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ThraP63058 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ThraP63058 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ThraP63058 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ThraP63058 Gm6433-201ENSMUST00000118634 875 ntBASIC17.38■□□□□ 0.37
ThraP63058 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ThraP63058 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ThraP63058 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ThraP63058 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ThraP63058 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ThraP63058 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.38■□□□□ 0.37
ThraP63058 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ThraP63058 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ThraP63058 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ThraP63058 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ThraP63058 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ThraP63058 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ThraP63058 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ThraP63058 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ThraP63058 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ThraP63058 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ThraP63058 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.37■□□□□ 0.37
ThraP63058 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ThraP63058 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ThraP63058 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ThraP63058 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ThraP63058 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ThraP63058 Mir6349-201ENSMUST00000184059 97 ntBASIC17.37■□□□□ 0.37
ThraP63058 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.37■□□□□ 0.37
ThraP63058 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms