Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Usp46P62069 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp46P62069 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp46P62069 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp46P62069 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Usp46P62069 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp46P62069 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp46P62069 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp46P62069 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp46P62069 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp46P62069 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Usp46P62069 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Usp46P62069 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp46P62069 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp46P62069 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp46P62069 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.98■□□□□ 0.47
Usp46P62069 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp46P62069 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp46P62069 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.97■□□□□ 0.47
Usp46P62069 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp46P62069 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp46P62069 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp46P62069 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp46P62069 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Usp46P62069 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp46P62069 Gm6659-201ENSMUST00000174752 547 ntBASIC17.97■□□□□ 0.47
Usp46P62069 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.97■□□□□ 0.47
Usp46P62069 Gm7370-201ENSMUST00000219471 767 ntBASIC17.97■□□□□ 0.47
Usp46P62069 Il3ra-202ENSMUST00000223589 738 ntBASIC17.97■□□□□ 0.47
Usp46P62069 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp46P62069 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp46P62069 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp46P62069 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp46P62069 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp46P62069 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp46P62069 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Usp46P62069 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp46P62069 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp46P62069 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp46P62069 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Usp46P62069 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp46P62069 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.96■□□□□ 0.47
Usp46P62069 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp46P62069 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp46P62069 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Usp46P62069 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Usp46P62069 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp46P62069 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Usp46P62069 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp46P62069 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp46P62069 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Usp46P62069 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Usp46P62069 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Usp46P62069 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp46P62069 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp46P62069 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.95■□□□□ 0.46
Usp46P62069 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Usp46P62069 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Usp46P62069 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.95■□□□□ 0.46
Usp46P62069 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Usp46P62069 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.95■□□□□ 0.46
Usp46P62069 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp46P62069 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.95■□□□□ 0.46
Usp46P62069 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp46P62069 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Usp46P62069 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp46P62069 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Usp46P62069 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp46P62069 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp46P62069 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Usp46P62069 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Usp46P62069 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp46P62069 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp46P62069 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp46P62069 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Usp46P62069 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp46P62069 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp46P62069 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp46P62069 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp46P62069 Gm17661-201ENSMUST00000170317 270 ntBASIC17.94■□□□□ 0.46
Usp46P62069 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp46P62069 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.94■□□□□ 0.46
Usp46P62069 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.94■□□□□ 0.46
Usp46P62069 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.94■□□□□ 0.46
Usp46P62069 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Usp46P62069 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp46P62069 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Usp46P62069 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp46P62069 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp46P62069 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp46P62069 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.94■□□□□ 0.46
Usp46P62069 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp46P62069 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp46P62069 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp46P62069 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp46P62069 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp46P62069 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp46P62069 Gm16061-201ENSMUST00000122167 857 ntBASIC17.93■□□□□ 0.46
Usp46P62069 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.93■□□□□ 0.46
Usp46P62069 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms