Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.07■□□□□ 0.64
VSX2P58304 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VSX2P58304 AC124283.5-201ENST00000624661 1809 ntBASIC19.07■□□□□ 0.64
VSX2P58304 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VSX2P58304 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VSX2P58304 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VSX2P58304 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VSX2P58304 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VSX2P58304 AP005212.1-201ENST00000581547 1997 ntBASIC19.07■□□□□ 0.64
VSX2P58304 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VSX2P58304 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
VSX2P58304 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VSX2P58304 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
VSX2P58304 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
VSX2P58304 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VSX2P58304 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VSX2P58304 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.07■□□□□ 0.64
VSX2P58304 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VSX2P58304 AC092667.1-201ENST00000434301 2586 ntBASIC19.06■□□□□ 0.64
VSX2P58304 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VSX2P58304 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.06■□□□□ 0.64
VSX2P58304 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VSX2P58304 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VSX2P58304 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VSX2P58304 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
VSX2P58304 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
VSX2P58304 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.06■□□□□ 0.64
VSX2P58304 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.06■□□□□ 0.64
VSX2P58304 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VSX2P58304 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
VSX2P58304 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VSX2P58304 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VSX2P58304 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
VSX2P58304 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VSX2P58304 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.06■□□□□ 0.64
VSX2P58304 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VSX2P58304 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VSX2P58304 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VSX2P58304 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
VSX2P58304 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VSX2P58304 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
VSX2P58304 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VSX2P58304 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VSX2P58304 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VSX2P58304 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VSX2P58304 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VSX2P58304 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VSX2P58304 AC098590.1-201ENST00000468126 897 ntBASIC19.05■□□□□ 0.64
VSX2P58304 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VSX2P58304 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
VSX2P58304 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.05■□□□□ 0.64
VSX2P58304 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
VSX2P58304 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VSX2P58304 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
VSX2P58304 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.05■□□□□ 0.64
VSX2P58304 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VSX2P58304 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
VSX2P58304 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
VSX2P58304 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.05■□□□□ 0.64
VSX2P58304 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.05■□□□□ 0.64
VSX2P58304 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
VSX2P58304 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
VSX2P58304 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.04■□□□□ 0.64
VSX2P58304 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VSX2P58304 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VSX2P58304 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VSX2P58304 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VSX2P58304 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VSX2P58304 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
VSX2P58304 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
VSX2P58304 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VSX2P58304 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
VSX2P58304 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.04■□□□□ 0.64
VSX2P58304 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
VSX2P58304 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
VSX2P58304 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
VSX2P58304 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VSX2P58304 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VSX2P58304 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.04■□□□□ 0.64
VSX2P58304 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
VSX2P58304 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VSX2P58304 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VSX2P58304 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
VSX2P58304 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VSX2P58304 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VSX2P58304 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.03■□□□□ 0.64
VSX2P58304 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VSX2P58304 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
VSX2P58304 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VSX2P58304 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VSX2P58304 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.03■□□□□ 0.64
VSX2P58304 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.03■□□□□ 0.64
VSX2P58304 AL158047.1-201ENST00000445918 881 ntBASIC19.03■□□□□ 0.64
VSX2P58304 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.03■□□□□ 0.64
VSX2P58304 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VSX2P58304 AC142381.4-202ENST00000563973 229 ntBASIC19.03■□□□□ 0.64
VSX2P58304 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.03■□□□□ 0.64
VSX2P58304 RN7SL471P-201ENST00000580476 299 ntBASIC19.03■□□□□ 0.64
VSX2P58304 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.03■□□□□ 0.64
VSX2P58304 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms