Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox3P53784 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox3P53784 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox3P53784 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.47■□□□□ 0.23
Sox3P53784 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.47■□□□□ 0.23
Sox3P53784 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox3P53784 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox3P53784 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox3P53784 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox3P53784 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox3P53784 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.46■□□□□ 0.23
Sox3P53784 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox3P53784 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sox3P53784 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox3P53784 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox3P53784 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox3P53784 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.46■□□□□ 0.23
Sox3P53784 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox3P53784 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Sox3P53784 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.46■□□□□ 0.23
Sox3P53784 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.46■□□□□ 0.23
Sox3P53784 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox3P53784 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox3P53784 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox3P53784 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.46■□□□□ 0.23
Sox3P53784 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox3P53784 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox3P53784 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox3P53784 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sox3P53784 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sox3P53784 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox3P53784 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox3P53784 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox3P53784 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox3P53784 Gm25016-201ENSMUST00000158399 131 ntBASIC16.45■□□□□ 0.22
Sox3P53784 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.45■□□□□ 0.22
Sox3P53784 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.45■□□□□ 0.22
Sox3P53784 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.45■□□□□ 0.22
Sox3P53784 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.45■□□□□ 0.22
Sox3P53784 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox3P53784 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox3P53784 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox3P53784 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox3P53784 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sox3P53784 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.45■□□□□ 0.22
Sox3P53784 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox3P53784 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox3P53784 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.45■□□□□ 0.22
Sox3P53784 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox3P53784 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox3P53784 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox3P53784 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox3P53784 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.44■□□□□ 0.22
Sox3P53784 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox3P53784 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox3P53784 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Sox3P53784 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox3P53784 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Sox3P53784 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox3P53784 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox3P53784 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox3P53784 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.44■□□□□ 0.22
Sox3P53784 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox3P53784 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox3P53784 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox3P53784 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sox3P53784 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox3P53784 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox3P53784 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox3P53784 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox3P53784 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Sox3P53784 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sox3P53784 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox3P53784 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox3P53784 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox3P53784 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox3P53784 Mir5130-201ENSMUST00000175160 84 ntBASIC16.43■□□□□ 0.22
Sox3P53784 Gm28033-201ENSMUST00000184224 96 ntBASIC16.43■□□□□ 0.22
Sox3P53784 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox3P53784 Gm5867-201ENSMUST00000063197 592 ntBASIC16.43■□□□□ 0.22
Sox3P53784 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.43■□□□□ 0.22
Sox3P53784 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox3P53784 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox3P53784 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Sox3P53784 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.43■□□□□ 0.22
Sox3P53784 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox3P53784 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.43■□□□□ 0.22
Sox3P53784 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox3P53784 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox3P53784 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Sox3P53784 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox3P53784 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox3P53784 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox3P53784 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sox3P53784 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox3P53784 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sox3P53784 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox3P53784 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Sox3P53784 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox3P53784 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms